Breed identification using breed-informative SNPs and machine learning based on whole genome sequence data and SNP chip data

Table 1 Numbers of bulls and sequencing depths of the 13 breeds

Breed	Code	N	Sequencing depth
Breed	Code	N	Min	Max	Mean (SD)
Normande	NMD	31	10.03	30.76	12.68 (4.59)
Yakut	YKT	31	10.11	20.97	13.45 (2.93)
Gelbvieh	GEL	33	10.03	21.13	14.83 (3.67)
Limousin	LIM	39	10.03	20.88	12.73 (3.00)
Montbeliarde	MBL	55	10.18	27.73	13.28 (4.30)
Hereford	HF	67	10.13	45.48	15.22 (5.48)
Norwegian Red	NWR	78	10.01	33.42	11.10 (2.62)
Charolais	CHA	72	10.02	21.35	13.48 (3.25)
Simmental	SIM	83	10.01	33.90	15.48 (5.21)
Brown Swiss	BS	120	10.12	60.01	18.34 (8.84)
Jersey	JER	127	10.05	31.55	14.12 (3.76)
Angus	ANG	159	10.03	36.91	17.78 (5.36)
Holstein	HOL	200	10.00	59.09	17.43 (8.75)

ISSN: 2049-1891