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Table 2 Hub genes screened with WGCNA in porcine LDM

From: Profiling of N6-methyladenosine methylation in porcine longissimus dorsi muscle and unravelling the hub gene ADIPOQ promotes adipogenesis in an m6A-YTHDF1–dependent manner

Gene stable ID

Gene name

MMvalue

GSvalue

Gene description

ENSSSCG00000039103

ADIPOQ

0.874557699

0.858025625

Adiponectin, C1Q and collagen domain containing [Source:VGNC Symbol; Acc:VGNC:85140]

ENSSSCG00000001844

PLIN1

0.855238258

0.785834744

Perilipin 1 [Source:VGNC Symbol; Acc:VGNC:91557]

ENSSSCG00000027404

UNC93A

0.864469943

0.688918599

unc-93 homolog A [Source:VGNC Symbol; Acc:VGNC:94711]

ENSSSCG00000025822

SFRP1

0.867467057

0.671675851

Secreted frizzled related protein 1 [Source:VGNC Symbol; Acc:VGNC:95493]

ENSSSCG00000034786

HACD2

0.864057374

0.645773129

3-hydroxyacyl-CoA dehydratase 2 [Source:VGNC Symbol; Acc:VGNC:88766]

ENSSSCG00000026850

SNCG

0.801110493

0.572908619

Synuclein gamma [Source:NCBI gene (formerly Entrezgene); Acc:100125343]

ENSSSCG00000006245

SDR16C5

0.838140788

0.569356922

Short chain dehydrogenase/reductase family 16C member 5 [Source:VGNC Symbol; Acc:VGNC:98853]

ENSSSCG00000011579

PPARγ

0.823399895

0.542931625

Peroxisome proliferator activated receptor gamma [Source:VGNC Symbol; Acc:VGNC:91684]

ENSSSCG00000011451

ITIH3

0.840818259

0.506913162

Inter-alpha-trypsin inhibitor heavy chain 3 [Source:VGNC Symbol; Acc:VGNC:89248]

ENSSSCG00000010478

FFAR4

0.953347586

0.485423388

Free fatty acid receptor 4 [Source:VGNC Symbol; Acc:VGNC:107392]

ENSSSCG00000015135

SORL1

0.88145227

0.479634802

Sortilin related receptor 1 [Source:HGNC Symbol; Acc:HGNC:11185]

ENSSSCG00000012138

ACE2

0.815256029

0.246877132

Angiotensin converting enzyme 2 [Source:VGNC Symbol; Acc:VGNC:85008]

  1. MMvalue Value of Module Membership, the correlation of the module eigengene and the gene expression profile; GSvalue Value of Gene Significance, the absolute value of the correlation between the gene and the trait