Selective footprints and genes relevant to cold adaptation and other phenotypic traits are unscrambled in the genomes of divergently selected chicken breeds

Table 6 HapFLK blocks revealed in the genomes of the studied chicken breeds¹

GGA	Breed	Position		Length, Mb	No. of SNPs	Most significant SNP	P-value
GGA	Breed	Start	End	Length, Mb	No. of SNPs	Most significant SNP	P-value
1	USH, OMF	82,083,018	82,184,177	0.101	6	82,184,177	7.29E-03
1	USH	117,913,388	118,392,895	0.480	14	118,357,776	6.83E-03
2	OMF, WCR	25,717,703	27,076,503	1.359	46	26,292,612	6.35E-03
2	USH, WCR	69,676,338	73,482,942	3.807	117	72,332,610	1.06E-03
5	OMF	30,484,744	30,832,693	0.348	13	30,660,125	7.14E-03
7	USH, OMF	100,840	1,540,849	1.440	64	1,327,148	2.66E-03
9	USH, RUW	23,051,176	24,121,334	1.070	56	23,581,143	3.85E-03
18	USH, OMF, WCR	36,059	824,291	0.788	42	493,446	9.58E-04

¹ Breeds: OMF Orloff Mille Fleur, RUW Russian White, USH Ushanka, WCR White Cornish

ISSN: 2049-1891