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Table 2 Detailed information about the identified SNPs

From: Identification of single nucleotide polymorphisms of PIK3R1 and DUSP1 genes and their genetic associations with milk production traits in dairy cows

Gene SNP GenBank No. Position (UMD3.1) Location Allele Allelic frequency Genotype Genotypic frequency
PIK3R1 c.*208G > A rs42590258 chr20:11410254 5’UTR G 0.64 AA 0.13
A 0.36 AG 0.46
   GG 0.41
c.*2776 T > C rs210389799 chr20:11329079 3´UTR T 0.73 CC 0.07
C 0.27 TC 0.41
   TT 0.52
c.*2962 T > C rs208819656 chr20:11328893 3´UTR T 0.72 CC 0.07
C 0.28 CT 0.42
   TT 0.51
c.*6275 T > A rs41255622 chr20:11325580 3´UTR T 0.52 AA 0.23
A 0.48 AT 0.50
   TT 0.27
g.11323546C > T rs133655926 chr20:11323546 3´flanking region C 0.52 CC 0.27
T 0.48 TC 0.51
   TT 0.22
g.11323118G > A rs211408208 chr20:11323118 3´flanking region G 0.72 AA 0.07
A 0.28 AG 0.42
   GG 0.51
DUSP1 g.4453141 T > G rs207593520 chr20:4453141 5´flanking region G 0.35 GG 0.13
T 0.65 GT 0.44
   TT 0.43
c.*1505G > A rs208460068 chr20:4449625 3´UTR A 0.31 AA 0.07
G 0.69 AG 0.47
   GG 0.46
g.4448024C > T rs209154772 chr20:4448024 3´flanking region C 0.68 CC 0.46
T 0.32 TC 0.45
   TT 0.09
g.4447105C > G rs210000760 chr20:4447105 3´flanking region C 0.68 CC 0.46
G 0.32 CG 0.45
   GG 0.09
  1. Note: UTR untranslated region