Identification of single nucleotide polymorphisms of PIK3R1 and DUSP1 genes and their genetic associations with milk production traits in dairy cows

Table 2 Detailed information about the identified SNPs

Gene	SNP	GenBank No.	Position (UMD3.1)	Location	Allele	Allelic frequency	Genotype	Genotypic frequency
PIK3R1	c.*208G > A	rs42590258	chr20:11410254	5’UTR	G	0.64	AA	0.13
					A	0.36	AG	0.46
							GG	0.41
	c.*2776 T > C	rs210389799	chr20:11329079	3´UTR	T	0.73	CC	0.07
					C	0.27	TC	0.41
							TT	0.52
	c.*2962 T > C	rs208819656	chr20:11328893	3´UTR	T	0.72	CC	0.07
					C	0.28	CT	0.42
							TT	0.51
	c.*6275 T > A	rs41255622	chr20:11325580	3´UTR	T	0.52	AA	0.23
					A	0.48	AT	0.50
							TT	0.27
	g.11323546C > T	rs133655926	chr20:11323546	3´flanking region	C	0.52	CC	0.27
					T	0.48	TC	0.51
							TT	0.22
	g.11323118G > A	rs211408208	chr20:11323118	3´flanking region	G	0.72	AA	0.07
					A	0.28	AG	0.42
							GG	0.51
DUSP1	g.4453141 T > G	rs207593520	chr20:4453141	5´flanking region	G	0.35	GG	0.13
					T	0.65	GT	0.44
							TT	0.43
	c.*1505G > A	rs208460068	chr20:4449625	3´UTR	A	0.31	AA	0.07
					G	0.69	AG	0.47
							GG	0.46
	g.4448024C > T	rs209154772	chr20:4448024	3´flanking region	C	0.68	CC	0.46
					T	0.32	TC	0.45
							TT	0.09
	g.4447105C > G	rs210000760	chr20:4447105	3´flanking region	C	0.68	CC	0.46
					G	0.32	CG	0.45
							GG	0.09

ISSN: 2049-1891