Table 9 Associations of haplotype polymorphisms in CIITA, HSPA8, SERPING1, and ATP2A3 with FEC for goat breeds

CIITA

CCTT

31

2.22 ± 0.12

55

2.06 ± 0.09

37

2.53 ± 0.09

2.44 ± 0.07

1.57 ± 0.03

TCAT

1

3.15 ± 0.66

1

3.31 ± 0.73

–

–

7

3.19 ± 0.30

–

–

TTAA

–

–

–

–

–

–

1

3.18 ± 0.79

–

–

HSPA8

GGAA

27

2.31 ± 0.13

37

2.09 ± 0.12^b

32

2.59 ± 0.10

93

2.45 ± 0.08

154

1.58 ± 0.03

AGAG

4

1.76 ± 0.33

16

1.87 ± 0.18^a

4

2.13 ± 0.29

50

2.47 ± 0.11

64

1.56 ± 0.05

AAGG

1

2.51 ± 0.67

3

3.00 ± 0.41^c

–

11

2.71 ± 0.24

5

1.54 ± 0.17

SERPING1

CCGG

14

2.40 ± 0.18

30

2.05 ± 0.13

18

2.48 ± 0.14

77

2.49 ± 0.09^a

152

1.57 ± 0.03

TCGT

14

2.13 ± 0.18

20

2.16 ± 0.17

17

2.59 ± 0.14

67

2.37 ± 0.08^a

71

1.55 ± 0.04

TTTT

4

2.14 ± 0.34

5

2.07 ± 0.34

2

2.48 ± 0.42

11

2.98 ± 0.24^b

3

2.09 ± 0.21

ATP2A3

AGAC

15

2.13 ± 0.18^b

20

2.32 ± 0.16^b

15

2.56 ± 0.15

70

2.50 ± 0.09^a

32

1.58 ± 0.07

GGAA

14

2.46 ± 0.18^c

22

1.83 ± 0.15^a

13

2.31 ± 0.16

61

2.36 ± 0.10^a

178

1.59 ± 0.38

AACC

3

1.89 ± 0.15^a

14

2.14 ± 0.19^a

9

2.80 ± 0.19

15

2.89 ± 0.21^b

3

1.39 ± 0.21

AAAC

–

–

–

–

–

–

3

2.97 ± 0.46^b

11

1.39 ± 0.11