Single nucleotide polymorphisms in candidate genes are significantly associated with resistance to Haemonchus contortus infection in goats

Table 6 Associations between SNP and fecal egg counts

Gene	SNP	Genotype			Association P-value	Multiple comparison test P-values
Gene	SNP	Number			Association P-value	Multiple comparison test P-values
CIITA	CIITA_161_C > T	CC	CT	TT	0.039*	TC-CC	TT-CC	TT-TC
	CIITA_161_C > T	494	9	1	0.039*	0.046*	0.828	0.977
	CIITA_481_A > T	AA	AT	TT	0.037*	AT-AA	TT-AA	TT-AT
	CIITA_481_A > T	2	8	495	0.037*	0.977	0.822	0.043*
HSPA8	HSPA8_1024_A > G	AA	AG	GG	0.014**	AG-AA	GG-AA	GG-AG
	HSPA8_1024_A > G	20	138	348	0.014**	0.097	0.547	0.031*
	HSPA8_1064_A > G	AA	AG	GG	0.014**	AG-AA	GG-AA	GG-AG
	HSPA8_1064_A > G	344	138	20	0.014**	0.031*	0.552	0.098
ESYT1	ESYT1_559_G > C	GG	GC	CC	0.024*	GC-CC	GG-CC	GG-GC
ESYT1	ESYT1_559_G > C	381	107	17	0.024*	0.029*	0.132	0.202
STAT5B	STAT5B_197_A > G	AA	AG	GG	0.021*	AG-AA	GG-AA	GG-AG
STAT5B	STAT5B_197_A > G	144	224	127	0.021*	0.849	0.129	0.023*
SERPING1	SERPING1_312_C > T	CC	TC	TT	0.003**	TC-CC	TT-CC	TT-TC
	SERPING1_312_C > T	292	189	25	0.003**	0.998	0.003**	0.004**
	SERPING1_615_G > T	GG	GT	TT	0.003**	GT-GG	TT-GG	TT-GT
	SERPING1_615_G > T	291	189	25	0.003**	0.998	0.002**	0.005**
ATP2A3	ATP2A3_150_A > G	AA	AG	GG	0.044*	AG-AA	GG-AA	GG-AG
	ATP2A3_150_A > G	59	155	290	0.044*	0.102	0.038*	0.925
	ATP2A3_680_A > C	AA	AC	CC	0.009**	AC-AA	CC-AA	CC-AC
	ATP2A3_680_A > C	289	167	45	0.009**	0.886	0.012**	0.037*

ISSN: 2049-1891