Skip to main content

Advertisement

Table 6 Associations between SNP and fecal egg counts

From: Single nucleotide polymorphisms in candidate genes are significantly associated with resistance to Haemonchus contortus infection in goats

Gene SNP Genotype Association
P-value
Multiple comparison test
P-values
Number
CIITA CIITA_161_C > T CC CT TT 0.039* TC-CC TT-CC TT-TC
494 9 1 0.046* 0.828 0.977
CIITA_481_A > T AA AT TT 0.037* AT-AA TT-AA TT-AT
2 8 495 0.977 0.822 0.043*
HSPA8 HSPA8_1024_A > G AA AG GG 0.014** AG-AA GG-AA GG-AG
20 138 348 0.097 0.547 0.031*
HSPA8_1064_A > G AA AG GG 0.014** AG-AA GG-AA GG-AG
344 138 20 0.031* 0.552 0.098
ESYT1 ESYT1_559_G > C GG GC CC 0.024* GC-CC GG-CC GG-GC
381 107 17 0.029* 0.132 0.202
STAT5B STAT5B_197_A > G AA AG GG 0.021* AG-AA GG-AA GG-AG
144 224 127 0.849 0.129 0.023*
SERPING1 SERPING1_312_C > T CC TC TT 0.003** TC-CC TT-CC TT-TC
292 189 25 0.998 0.003** 0.004**
SERPING1_615_G > T GG GT TT 0.003** GT-GG TT-GG TT-GT
291 189 25 0.998 0.002** 0.005**
ATP2A3 ATP2A3_150_A > G AA AG GG 0.044* AG-AA GG-AA GG-AG
59 155 290 0.102 0.038* 0.925
ATP2A3_680_A > C AA AC CC 0.009** AC-AA CC-AA CC-AC
289 167 45 0.886 0.012** 0.037*
  1. * P < 0.05, ** P < 0.01