Table 2 Candidate genes and descriptions of SNP
Gene | SNP | Nucleotide | Chromosome No. | Amino acid | ||
|---|---|---|---|---|---|---|
Position | Alleles | Encode | Region | |||
CIITA | CIITA_161_C > T | 9473550 | C/T | 25 | R > C | Coding |
CIITA | CIITA_481_A > T | 9473870 | A/T | 25 | D > E | Coding |
HSPA8 | HSPA8_1024_A > G | 48655334 | A/G | 15 | – | Intron8–9 |
HSPA8 | HSPA8_1064_A > G | 48655374 | A/G | 15 | – | Intron8–9 |
ESYT1 | ESYT1_559_G > C | 56567955 | G/C | 5 | – | Intron5–6 |
STAT5B | STAT5B_197_A > G | 41961106 | A/G | 19 | – | 3’UTR |
SERPING1 | SERPING1_312_C > T | 2421828 | C/T | 15 | – | Intron6–7 |
SERPING1 | SERPING1_615_G > T | 2422132 | G/T | 15 | – | Intron5–6 |
ATP2A3 | ATP2A3_150_A > G | 24358932 | A/G | 19 | – | 3’UTR |
ATP2A3 | ATP2A3_680_A > C | 24358402 | A/C | 19 | – | 3’UTR |