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Table 2 Candidate genes and descriptions of SNP

From: Single nucleotide polymorphisms in candidate genes are significantly associated with resistance to Haemonchus contortus infection in goats

Gene SNP Nucleotide Chromosome No. Amino acid
Position Alleles Encode Region
CIITA CIITA_161_C > T 9473550 C/T 25 R > C Coding
CIITA CIITA_481_A > T 9473870 A/T 25 D > E Coding
HSPA8 HSPA8_1024_A > G 48655334 A/G 15 Intron8–9
HSPA8 HSPA8_1064_A > G 48655374 A/G 15 Intron8–9
ESYT1 ESYT1_559_G > C 56567955 G/C 5 Intron5–6
STAT5B STAT5B_197_A > G 41961106 A/G 19 3’UTR
SERPING1 SERPING1_312_C > T 2421828 C/T 15 Intron6–7
SERPING1 SERPING1_615_G > T 2422132 G/T 15 Intron5–6
ATP2A3 ATP2A3_150_A > G 24358932 A/G 19 3’UTR
ATP2A3 ATP2A3_680_A > C 24358402 A/C 19 3’UTR
  1. Amino acid symbols: R = Arginine, C = Cysteine, D = Aspartic acid, E = Glutamic acid