Trait
|
SNP name
|
BTA
|
Position
|
SNPa
|
MAF
|
P-value
|
SNP effectb
|
SE
|
PCGc
|
---|
Saturated FA
|
C22:0
|
BovineHD0600017622
|
6
|
63657334
|
G/A
|
0.342
|
5.80E-07
|
0.002212982
|
0.000454901
|
–
|
Monounsaturated FA
|
C14:1 cis-9
|
BovineHD2600005461
|
26
|
21140458
|
G/A
|
0.3791
|
1.72E-07
|
−0.116976244
|
0.0247878
|
SCD
|
C14:1 cis-9
|
BovineHD2600005464
|
26
|
21144884
|
G/A
|
0.3764
|
2.62E-07
|
−0.114923399
|
0.0247513
|
SCD
|
C14:1 cis-9
|
BovineHD2600005466
|
26
|
21146794
|
G/A
|
0.3984
|
1.02E-07
|
−0.118178451
|
0.0242669
|
SCD
|
C14:1 cis-9
|
BovineHD2600005465
|
26
|
21146019
|
G/A
|
0.397
|
1.22E-07
|
−0.117257801
|
0.0241962
|
SCD
|
C18:1 cis-9
|
BovineHD0600017761
|
6
|
64216527
|
A/G
|
0.0989
|
2.90E-07
|
−2.77403258
|
0.55471
|
–
|
C18:1 cis-9
|
BovineHD0600017773
|
6
|
64280345
|
C/A
|
0.1511
|
4.12E-07
|
−2.356278809
|
0.477168
|
–
|
C20:1 cis-11
|
BovineHD0800012682
|
8
|
42650702
|
G/A
|
0.05769
|
4.89E-07
|
0.105893342
|
0.00215886
|
SMARCA2
|
Polyunsaturated FA
|
C22:6 n-3
|
BovineHD0100034705
|
1
|
122808627
|
G/A
|
0.364
|
3.38E-10
|
0.004481756
|
0.00137556
|
PLSCR5
|
C22:6 n-3
|
BovineHD0200040673
|
2
|
73693578
|
G/A
|
0.0728
|
9.19E-08
|
0.007072896
|
0.00233111
|
CLASP1
|
C22:6 n-3
|
BovineHD0300010307
|
3
|
33051872
|
A/G
|
0.06319
|
1.31E-07
|
0.007624579
|
0.0025411
|
CYM
|
C22:6 n-3
|
BovineHD1000015166
|
10
|
50404371
|
A/C
|
0.1456
|
4.86E-08
|
0.005148315
|
0.00176711
|
–
|
C22:6 n-3
|
BovineHD1000029857
|
10
|
102483257
|
A/C
|
0.1181
|
3.48E-07
|
0.005129722
|
0.00198152
|
–
|
C22:6 n-3
|
BovineHD1400018498
|
14
|
66120964
|
A/G
|
0.1168
|
8.09E-08
|
0.005746942
|
0.0019963
|
–
|
C22:6 n-3
|
BovineHD2800003012
|
28
|
9852321
|
A/G
|
0.06044
|
3.59E-07
|
−0.006883573
|
0.00246427
|
–
|
Fatty acid groups
|
SFA
|
BovineHD0600017761
|
6
|
64216527
|
A/G
|
0.0989
|
4.29E-07
|
2.276282318
|
0.454104
|
–
|
PUFA
|
BovineHD0500031844
|
5
|
110438965
|
A/G
|
0.06456
|
3.26E-07
|
0.629658268
|
0.126903
|
BAIAP2L2, MAFF, TMEM184B
|
MUFA
|
BovineHD0600017761
|
6
|
64216527
|
A/G
|
0.0989
|
8.95E-08
|
−2.641123459
|
0.505798
|
–
|
MUFA
|
BovineHD0600017773
|
6
|
64280345
|
C/A
|
0.1511
|
4.43E-07
|
−2.15015271
|
0.436519
|
–
|
n-6
|
BovineHD0500031844
|
5
|
110438965
|
A/G
|
0.06456
|
1.21E-07
|
0.5470253
|
0.148374
|
BAIAP2L2, MAFF, TMEM184B
|
PUFA/SFA
|
BovineHD0500031844
|
5
|
110438965
|
A/G
|
0.06456
|
5.56E-07
|
0.01371442
|
0.00280407
|
BAIAP2L2, MAFF, TMEM184B
|
PUFA/SFA
|
BovineHD0900022545
|
9
|
81183556
|
G/A
|
0.07005
|
5.48E-07
|
0.012964716
|
0.00264927
|
MIR2284AA-4
|
PUFA/SFA
|
BovineHD1500021109
|
15
|
73179761
|
A/C
|
0.4931
|
7.80E-08
|
−0.007313559
|
0.0013969
|
–
|
- aminor allele/ major allele
- bThe SNP effect was the additive effect calculated by FarmCPU
- cPositional/putative candidate gene