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Table 1 Sequencing strategies used for genotype imputation

From: Imputation from SNP chip to sequence: a case study in a Chinese indigenous chicken population

Total X Different sequencing scenarios with fixed cost (X × N)
24 1 × 24 2 × 12 3 × 8 4 × 6 6 × 4 8 × 3 2 × 12
36 2 × 18 3 × 12 4 × 9 6 × 6 9 × 4 12 × 3 18 × 2
72 3 × 24 4 × 18 6 × 12 8 × 9 9 × 8 12 × 6 18 × 4
96 4 × 24 6 × 16 8 × 12 12 × 8 16 × 6   
144 6 × 24 8 × 18 12 × 12 16 × 9 18 × 8   
  1. Total X total cost of genotyping, X × N sequenced depth (X) times the number of sequenced animals (N)