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Table 5 Effects of the SNPs on SCS and cytokines of Chinese Holstein and Sanhe cattle

From: Novel SNPs in IL-17F and IL-17A genes associated with somatic cell count in Chinese Holstein and Inner-Mongolia Sanhe cattle

SNPs

Breed

Genotype, n

SCS

IL-4,

IL-6,

IL-17,

IFN-γ,

TNF-α,

ng/mL

pg/mL

pg/mL

pg/mL

pg/mL

IL-17 F

Holstein

CC (228)

5.93 ± 0.47a

1.105 ± 0.056

174.87 ± 6.80

14.44 ± 0.82

46.58 ± 2.00

1.16 ± 0.05

g.24392436 C > T

 

CT (91)

4.96 ± 0.55b

1.153 ± 0.062

179.86 ± 7.56

14.47 ± 0.91

44.44 ± 2.22

1.15 ± 0.06

  

TT (16)

4.60 ± 0.92b

1.182 ± 0.101

175.49 ± 12.29

17.09 ± 1.48

45.53 ± 3.62

1.09 ± 0.09

  

P value

<0.05

0.50

0.70

0.17

0.47

0.79

 

Sanhe

CC(76)

4.14 ± 0.81

0.91 ± 0.067

107.27 ± 9.80

12.38 ± 2.10A

37.06 ± 3.36

1.06 ± 0.090

  

CT(38)

4.31 ± 0.86

0.93 ± 0.071

109.09 ± 10.46

10.99 ± 2.24A

36.28 ± 3.59

1.03 ± 0.096

  

TT(9)

4.10 ± 1.08

0.92 ± 0.089

118.35 ± 13.06

17.68 ± 2.87B

37.60 ± 4.48

0.95 ± 0.12

  

P value

0.9

0.94

0.62

<0.01

0.87

0.41

IL-17A

Holstein

AA (51)

5.51 ± 0.60

1.026 ± 0.070B

179.33 ± 8.58

14.05 ± 1.04

43.96 ± 2.52

1.15 ± 0.07

g.24345410 A > G

 

AG (149)

5.71 ± 0.51

1.190 ± 0.057A

173.45 ± 7.05

15.12 ± 0.85

46.29 ± 2.07

1.13 ± 0.06

  

GG (137)

5.35 ± 0.51

1.105 ± 0.058a

178.59 ± 7.17

14.55 ± 0.87

46.13 ± 2.11

1.16 ± 0.06

  

P value

0.73

<0.05

0.59

0.46

0.55

0.79

 

Sanhe

AA(36)

4.65 ± 0.82

0.872 ± 0.067b

104.20 ± 9.99

11.67 ± 2.24

35.80 ± 3.46

1.04 ± 0.094

  

AG(42)

3.77 ± 0.82

0.965 ± 0.066a

108.42 ± 9.94

11.86 ± 2.23

37.64 ± 3.44

1.08 ± 0.093

  

GG(45)

4.19 ± 0.85

0.905 ± 0.069ab

115.65 ± 10.39

13.67 ± 2.34

37.72 ± 3.60

1.03 ± 0.097

  

P value

0.14

<0.05

0.09

0.18

0.51

0.56

  1. Means with different superscripts within the same column and breed are significantly different at P < 0.01 (capital letter) or P < 0.05 (small letter)