Whole-genome methylation analysis reveals epigenetic variation between wild-type and nontransgenic cloned, ASMT transgenic cloned dairy goats generated by the somatic cell nuclear transfer

Table 5 Comparison results of reference genomic data

Sample	Total Reads	Reads mapped to genome	Mapped Reads ratio, %	Coverage, %	Mean depth	Bisulfite conversion rate, %
K2020	917,384,276	840,319,806	91.60	107.38	43.59	99.41
S2	566,928,456	434,321,980	76.61	107.26	22.23	99.42
K03	643,364,184	581,957,164	90.81	107.14	30.11	99.41

(1) Sample: Name of sequencing sample
(2) Total Reads: The number of all sequenced Reads
(3) Reads mapped to genome: Number of Reads mapped to the reference genome
(4) Mapped Reads ratio: The proportion of Reads Mapped against the reference genome
(5) Coverage: Covered Bases/Genome Bases × 100%
(6) Mean depth: The average depth of covering bases
(7) Bisulfite conversion rate: Cytosine conversion rate of Bisulfite treatment (Unmethylated/Total Cytosine*100%)

ISSN: 2049-1891