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Table 2 The sequences of primers specific to the analyzed bacteria species

From: Dietary Coleus amboinicus Lour. decreases ruminal methanogenesis and biohydrogenation, and improves meat quality and fatty acid composition in longissimus thoracis muscle of lambs

Species

Primer sequences (5′ to 3′)

Reference

Streptococcus bovis

F: TTCCTAGAGATAGGAAGTTTCTTCGG

[17]

R: ATGATGGCAACTAACAATAGGGGT

Ruminococcus flavefaciens

F:CGAACGGAGATAATTTGAGTTTACTTAGG

[18]

R: CGGTCTCTGTATGTTATGAGGTATTACC

Ruminococcus albus

F: CCCTAAAAGCAGTCTTAGTTCG

[19]

R: CCTCCTTGCGGTTAGAACA

Megasphaera elsdenii

F: AGATGGGGACAACAGCTGGA

[17]

R: CGAAAGCTCCGAAGAGCCT

Prevotella spp.

F: GAAGGTCCCCCACATTG

[17]

R:CAATCGGAGTTCTTCGTG

Lactobacillus spp.

F: TATGGTAATTGTGTGNCAGCMGCCGCGGTAA

[20]

R: AGTCAGTCAGCCGGACTACHVGGGTWTCTAAT

Fibrobacter succinogenes

F: GTTCGGAATTACTGGGCGTAAA

[21]

R: CGCCTGCCCCTGAACTATC

Butyrivibrio proteoclasticus

F: TCCTAGTGTAGCGGTGAAATG

[22]

R: TTAGCGACGGCACTGAATGCCTA

Butyrivibrio fibrisolvens

F: ACACACCGCCCGTCACA

[23]

R: TCCTTACGGTTGGGTCACAGA

Anaerovibrio lipolytica

F: GAAATGGATTCTAGTGGCAAACG

[24]

R:ACATCGGTCATGCGACCAA