Item | Treatment1 | SEM | P-value | Â | Â | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
CON | FUM | NPD | FN | Week | FUM | NPD | F × N | F × week | N × week | ||
Bacteroidetes, mean = 64.7% | |||||||||||
 Prevotella | 37.4 | 36.5 | 38.3 | 36.3 | 0.95 | 0.166 | 0.147 | 0.719 | 0.571 | 0.857 | 0.791 |
 YRC22 | 2.25 | 1.96 | 2.19 | 1.95 | 0.207 | 0.332 | 0.221 | 0.871 | 0.905 | 0.837 | 0.791 |
 CF231 | 1.42b | 1.79a | 1.77a | 1.79a | 0.098 | 0.953 | 0.069 | 0.100 | 0.098 | 0.339 | 0.704 |
 BF311 | 0.12 | 0.15 | 0.17 | 0.17 | 0.016 | 0.669 | 0.452 | 0.076 | 0.313 | 0.213 | 0.635 |
 Paludibacter | 0.08 | 0.28 | 0.15 | 0.08 | 0.089 | 0.161 | 0.521 | 0.482 | 0.161 | 0.135 | 0.361 |
 [Prevotella] | 0.11 | 0.09 | 0.11 | 0.14 | 0.017 | 0.435 | 0.656 | 0.223 | 0.236 | 0.506 | 0.471 |
Firmicutes, mean = 19.4% | |||||||||||
 Ruminococcus | 1.83 | 1.94 | 1.67 | 2.05 | 0.102 | 0.001 | 0.034 | 0.811 | 0.184 | 0.891 | 0.749 |
 Succiniclasticum | 1.32 | 1.52 | 1.16 | 1.48 | 0.099 | 0.043 | 0.022 | 0.320 | 0.579 | 0.890 | 0.481 |
 Oscillospira | 1.38 | 0.97 | 1.72 | 0.77 | 0.198 | 0.199 | 0.005 | 0.726 | 0.209 | 0.932 | 0.252 |
 Coprococcus | 1.12 | 1.22 | 1.05 | 1.43 | 0.120 | 0.524 | 0.071 | 0.580 | 0.243 | 0.061 | 0.683 |
 02d06 | 0.75 | 0.80 | 0.73 | 0.89 | 0.073 | < 0.001 | 0.185 | 0.673 | 0.496 | 0.808 | 0.578 |
Butyrivibrio | 0.79 | 0.86 | 0.66 | 0.83 | 0.079 | 0.005 | 0.146 | 0.310 | 0.575 | 0.158 | 0.480 |
 RFN20 | 0.84 | 0.56 | 0.79 | 0.53 | 0.100 | 0.266 | 0.020 | 0.696 | 0.906 | 0.984 | 0.231 |
 Clostridium | 0.46 | 0.52 | 0.42 | 0.50 | 0.029 | 0.005 | 0.038 | 0.231 | 0.782 | 0.227 | 0.869 |
 Selenomonas | 0.23 | 0.29 | 0.24 | 0.38 | 0.048 | 0.001 | 0.070 | 0.354 | 0.380 | 0.137 | 0.815 |
 Moryella | 0.24 | 0.23 | 0.23 | 0.27 | 0.023 | < 0.001 | 0.672 | 0.477 | 0.342 | 0.331 | 0.662 |
 Shuttleworthia | 0.13b | 0.14b | 0.10b | 0.19a | 0.015 | 0.062 | 0.004 | 0.470 | 0.011 | 0.065 | 0.713 |
Proteobacteria, mean = 6.5% | |||||||||||
 Ruminobacter | 1.67 | 1.76 | 1.50 | 1.14 | 0.223 | 0.828 | 0.548 | 0.102 | 0.342 | 0.097 | 0.875 |
 Succinivibrio | 0.43 | 0.55 | 0.63 | 0.35 | 0.144 | 0.006 | 0.578 | 0.987 | 0.189 | 0.340 | 0.849 |
Tenericutes, mean = 2.6% | |||||||||||
 Anaeroplasma | 0.53 | 0.39 | 0.41 | 0.43 | 0.049 | < 0.001 | 0.216 | 0.397 | 0.150 | 0.142 | 0.007 |
Fibrobacteres, mean = 1.6% | |||||||||||
 Fibrobacteres | 1.55 | 1.70 | 1.71 | 1.32 | 0.180 | 0.024 | 0.520 | 0.553 | 0.160 | 0.508 | 0.888 |
Synergistetes, mean = 0.6% | |||||||||||
 TG5 | 0.80 | 0.35 | 0.63 | 0.30 | 0.163 | 0.007 | 0.035 | 0.501 | 0.743 | 0.037 | 0.089 |