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Table 1 PCR primers used in quantitative real-time PCR

From: Specific inhibition of Streptococcus bovis by endolysin LyJH307 supplementation shifts the rumen microbiota and metabolic pathways related to carbohydrate metabolism

Target species

Primer

Sequence (5’ → 3’)

Size, bp

Efficiencya

References

General bacteria

F

CGGCAACGAGCGCAACCC

130

1.975

[28]

R

CCATTGTAGCACGTGTGTAGCC

Ciliate protozoa

F

GCTTTCGWTGGTAGTGTATT

223

1.872

[29]

R

CTTGCCCTCYAATCGTWCT

R

CCCATCCTATAGCGGTAAACCTTTG

Streptococcus bovis

F

TTCCTAGAGATAGGAAGTTTCTTCGG

127

1.944

[30]

R

ATGATGGCAACTAACAATAGGGGT

  1. bp Base pair
  2. a Efficiency is calculated as [10–1/slope]