Fig. 5

Set-up and validation of the MPigut-IVM: comparison with in vivo data. I. Comparison of the top 15 bacterial families between in vivo proximal colon luminal samples and in vitro fermentation samples from the bioreactor medium at day 7 corresponding to the end of the stabilization phase. The black colour corresponds to an abundance of 0. On the X axis: “F” = “Fermentation” and “D” = “Day”. J. Comparison of the top 15 families between in vivo proximal colon mucosal samples and in vitro mucin beads at day 7 corresponding to the end of the stabilization phase. The black colour corresponds to an abundance of 0. On the X axis: “F” = “Fermentation” and “D” = “Day”