Table 1 Information of 17 SNPs of AGPAT3 gene with genotypic and allelic frequencies

g. 146702957G > A

5′ flanking region

Chr1: 146702957

rs210638665

NCBI

AA

78

0.0741

A

0.2692

GG

564

0.5356

G

0.7308

GA

411

0.3903

g. 146704373A > G

5′ flanking region

Chr1: 146704373

rs209442459

NCBI

AA

560

0.5369

A

0.7311

GG

78

0.0748

G

0.2689

GA

405

0.3883

g. 146704618A > G

5′ flanking region

Chr1: 146704618

rs110551271

NCBI

AA

520

0.4910

A

0.7030

GG

90

0.0850

G

0.2970

GA

449

0.4240

g. 146704699G > A

5′ flanking region

Chr1: 146704699

rs110278717

NCBI

AA

113

0.1076

A

0.3219

GG

487

0.4638

G

0.6781

GA

450

0.4286

g. 146705692G > A

5′ UTR

Chr1: 146705692

rs43281404

NCBI

AA

10

0.0095

A

0.1360

GG

778

0.7374

G

0.8640

AG

267

0.2531

g. 146725085 T > C

Intron-5

Chr1: 146725085

rs110897007

NCBI

GG

634

0.6021

G

0.7835

TT

37

0.0351

T

0.2165

GT

382

0.3628

g. 146726096A > G

Intron-6

Chr1: 146726096

rs378285374

NCBI

CC

380

0.3647

C

0.6027

TT

166

0.1593

T

0.3973

CT

496

0.4760

g. 146729107A > C

Intron-7

Chr1: 146729107

rs43276015

NCBI

AA

166

0.1582

A

0.3990

GG

378

0.3603

G

0.6010

GA

505

0.4814

g. 146735090G > T

3′ UTR

Chr1:146735090

rs379405887

NCBI

CC

169

0.1608

C

0.4015

TT

376

0.3578

T

0.5985

CT

506

0.4814

g. 146737188C > T

3′ flanking region

Chr1: 146737188

rs383583298

NCBI

CC

376

0.3588

C

0.6007

TT

165

0.1574

T

0.3993

CT

507

0.4838

g. 146737545G > A

3′ flanking region

Chr1: 146737545

rs43766238

NCBI

GG

166

0.1587

G

0.3991

TT

377

0.3604

T

0.6009

GT

503

0.4809

g. 146737748 T > C

3′ flanking region

Chr1: 146737748

rs43760756

NCBI

CC

169

0.1608

C

0.4015

TT

376

0.3578

T

0.5985

TC

506

0.4814

g. 146737849C > T

3′ flanking region

Chr1: 146737849

rs43760757

NCBI

CC

371

0.3540

C

0.5973

TT

167

0.1594

T

0.4027

CT

510

0.4866

g. 146737879 T > G

3′ flanking region

Chr1: 146737879

rs43760758

NCBI

AA

12

0.0114

A

0.1360

GG

780

0.7393

G

0.8640

AG

263

0.2493

g. 146737916 T > C

3′ flanking region

Chr1: 146737916

rs43760759

NCBI

CC

536

0.5174

C

0.7210

TT

78

0.0753

T

0.2790

TC

422

0.4073

g. 146737946C > T

3′ flanking region

Chr1: 146737946

rs43760760

NCBI

AA

894

0.8442

A

0.9193

GG

6

0.0057

G

0.0807

AG

159

0.1501

g. 146738055G > A

3′ flanking region

Chr1: 146738055

rs382304348

NCBI

AA

208

0.2006

A

0.4619

CC

287

0.2768

C

0.5380

CA

542

0.5227