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Table 6 Genomic regions associated with vulva score categories per dataseta

From: Phenotypic and genomic relationships between vulva score categories and reproductive performance in first-parity sows

Dataset

SSC

Mb

No. of SNP

%TGVM

Farm1

4

63

26

1.2

13

23

19

2.7

15

52

15

3.2

Farm3

1

85

18

1.8

3

33–34

54

1.6

4

84

25

1.3

4

115

24

1.2

5

91–99

226

3.2

6

102

21

1.2

9

46

25

1.3

10

1

26

1.4

10

24–25

41

1.9

18

14

31

1.7

Farms1 + 2 + 3

1

85

18

3.0

1

160

21

4.9

1

237

26

1.8

3

33–34

54

7.4

4

84

25

1.4

7

103–104

44

3.6

8

49

30

1.9

8

137

15

1.1

10

24–25

41

1.0

13

4

30

2.5

16

69

20

1.2

18

14

31

3.3

  1. SSC Sus scrofa chromosome, Mb Megabase location of the SNP window, No. of SNP Number of SNPs in the SNP window, %TGVM Total genetic variance accounted for by the markers
  2. aThere were no genomic regions explaining more than 1%TGVM for the Farm2 data