TY - JOUR AU - Larson, G. AU - Dobney, K. AU - Albarella, U. AU - Fang, M. AU - Matisoo-Smith, E. AU - Robins, J. PY - 2005 DA - 2005// TI - Worldwide phylogeography of wild boar reveals multiple centers of pig domestication JO - Science. VL - 307 UR - https://doi.org/10.1126/science.1106927 DO - 10.1126/science.1106927 ID - Larson2005 ER - TY - JOUR AU - Bosse, M. AU - Megens, H. J. AU - Frantz, L. A. AU - Madsen, O. AU - Larson, G. AU - Paudel, Y. PY - 2014 DA - 2014// TI - Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression JO - Nat Commun VL - 5 UR - https://doi.org/10.1038/ncomms5392 DO - 10.1038/ncomms5392 ID - Bosse2014 ER - TY - JOUR AU - Visscher, P. M. AU - Wray, N. R. AU - Zhang, Q. AU - Sklar, P. AU - McCarthy, M. I. AU - Brown, M. A. PY - 2017 DA - 2017// TI - 10 years of GWAS discovery: biology, function, and translation JO - Am J Hum Genet VL - 101 UR - https://doi.org/10.1016/j.ajhg.2017.06.005 DO - 10.1016/j.ajhg.2017.06.005 ID - Visscher2017 ER - TY - JOUR AU - Johansson Moller, M. AU - Chaudhary, R. AU - Hellmen, E. AU - Hoyheim, B. AU - Chowdhary, B. AU - Andersson, L. PY - 1996 DA - 1996// TI - Pigs with the dominant white coat color phenotype carry a duplication of the KIT gene encoding the mast/stem cell growth factor receptor JO - Mamm Genome VL - 7 UR - https://doi.org/10.1007/s003359900244 DO - 10.1007/s003359900244 ID - Johansson Moller1996 ER - TY - JOUR AU - Giuffra, E. AU - Tornsten, A. AU - Marklund, S. AU - Bongcam-Rudloff, E. AU - Chardon, P. AU - Kijas, J. M. PY - 2002 DA - 2002// TI - A large duplication associated with dominant white color in pigs originated by homologous recombination between LINE elements flanking KIT JO - Mamm Genome VL - 13 UR - https://doi.org/10.1007/s00335-002-2184-5 DO - 10.1007/s00335-002-2184-5 ID - Giuffra2002 ER - TY - JOUR AU - Wei, W. H. AU - Koning, D. J. AU - Penman, J. C. AU - Finlayson, H. A. AU - Archibald, A. L. AU - Haley, C. S. PY - 2007 DA - 2007// TI - QTL modulating ear size and erectness in pigs JO - Anim Genet VL - 38 UR - https://doi.org/10.1111/j.1365-2052.2007.01591.x DO - 10.1111/j.1365-2052.2007.01591.x ID - Wei2007 ER - TY - JOUR AU - Say, Y. H. PY - 2017 DA - 2017// TI - The association of insertions/deletions (INDELs) and variable number tandem repeats (VNTRs) with obesity and its related traits and complications JO - J Physiol Anthropol VL - 36 UR - https://doi.org/10.1186/s40101-017-0142-x DO - 10.1186/s40101-017-0142-x ID - Say2017 ER - TY - JOUR AU - Hindorff, L. A. AU - Sethupathy, P. AU - Junkins, H. A. AU - Ramos, E. M. AU - Mehta, J. P. AU - Collins, F. S. PY - 2009 DA - 2009// TI - Potential etiologic and functional implications of genome-wide association loci for human diseases and traits JO - Proc Natl Acad Sci U S A VL - 106 UR - https://doi.org/10.1073/pnas.0903103106 DO - 10.1073/pnas.0903103106 ID - Hindorff2009 ER - TY - JOUR AU - Mills, R. E. AU - Pittard, W. S. AU - Mullaney, J. M. AU - Farooq, U. AU - Creasy, T. H. AU - Mahurkar, A. A. PY - 2011 DA - 2011// TI - Natural genetic variation caused by small insertions and deletions in the human genome JO - Genome Res VL - 21 UR - https://doi.org/10.1101/gr.115907.110 DO - 10.1101/gr.115907.110 ID - Mills2011 ER - TY - JOUR AU - Zhang, F. AU - Gu, W. AU - Hurles, M. E. AU - Lupski, J. R. PY - 2009 DA - 2009// TI - Copy number variation in human health, disease, and evolution JO - Annu Rev Genomics Hum Genet VL - 10 UR - https://doi.org/10.1146/annurev.genom.9.081307.164217 DO - 10.1146/annurev.genom.9.081307.164217 ID - Zhang2009 ER - TY - JOUR AU - Redon, R. AU - Ishikawa, S. AU - Fitch, K. R. AU - Feuk, L. AU - Perry, G. H. AU - Andrews, T. D. PY - 2006 DA - 2006// TI - Global variation in copy number in the human genome JO - Nature. VL - 444 UR - https://doi.org/10.1038/nature05329 DO - 10.1038/nature05329 ID - Redon2006 ER - TY - JOUR AU - Stranger, B. E. AU - Forrest, M. S. AU - Dunning, M. AU - Ingle, C. E. AU - Beazley, C. AU - Thorne, N. PY - 2007 DA - 2007// TI - Relative impact of nucleotide and copy number variation on gene expression phenotypes JO - Science. VL - 315 UR - https://doi.org/10.1126/science.1136678 DO - 10.1126/science.1136678 ID - Stranger2007 ER - TY - JOUR AU - Ionita-Laza, I. AU - Rogers, A. J. AU - Lange, C. AU - Raby, B. A. AU - Lee, C. PY - 2009 DA - 2009// TI - Genetic association analysis of copy-number variation (CNV) in human disease pathogenesis JO - Genomics. VL - 93 UR - https://doi.org/10.1016/j.ygeno.2008.08.012 DO - 10.1016/j.ygeno.2008.08.012 ID - Ionita-Laza2009 ER - TY - JOUR AU - Zhou, Y. AU - Utsunomiya, Y. T. AU - Xu, L. AU - HA, H. AU - Bickhart, D. M. AU - Alexandre, P. A. PY - 2016 DA - 2016// TI - Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus JO - BMC Genomics VL - 17 UR - https://doi.org/10.1186/s12864-016-2461-4 DO - 10.1186/s12864-016-2461-4 ID - Zhou2016 ER - TY - JOUR AU - Fowler, K. E. AU - Pong-Wong, R. AU - Bauer, J. AU - Clemente, E. J. AU - Reitter, C. P. AU - Affara, N. A. PY - 2013 DA - 2013// TI - Genome wide analysis reveals single nucleotide polymorphisms associated with fatness and putative novel copy number variants in three pig breeds JO - BMC Genomics VL - 14 UR - https://doi.org/10.1186/1471-2164-14-784 DO - 10.1186/1471-2164-14-784 ID - Fowler2013 ER - TY - JOUR AU - Kodama, Y. AU - Shumway, M. AU - Leinonen, R. PY - 2012 DA - 2012// TI - International Nucleotide Sequence Database C. The Sequence Read Archive: explosive growth of sequencing data JO - Nucleic Acids Res VL - 40 UR - https://doi.org/10.1093/nar/gkr854 DO - 10.1093/nar/gkr854 ID - Kodama2012 ER - TY - JOUR AU - Bolger, A. M. AU - Lohse, M. AU - Usadel, B. PY - 2014 DA - 2014// TI - Trimmomatic: a flexible trimmer for Illumina sequence data JO - Bioinformatics. VL - 30 UR - https://doi.org/10.1093/bioinformatics/btu170 DO - 10.1093/bioinformatics/btu170 ID - Bolger2014 ER - TY - JOUR AU - Li, H. AU - Durbin, R. PY - 2009 DA - 2009// TI - Fast and accurate short read alignment with burrows-wheeler transform JO - Bioinformatics. VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp324 DO - 10.1093/bioinformatics/btp324 ID - Li2009 ER - TY - JOUR AU - McKenna, A. AU - Hanna, M. AU - Banks, E. AU - Sivachenko, A. AU - Cibulskis, K. AU - Kernytsky, A. PY - 2010 DA - 2010// TI - The genome analysis toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data JO - Genome Res VL - 20 UR - https://doi.org/10.1101/gr.107524.110 DO - 10.1101/gr.107524.110 ID - McKenna2010 ER - TY - JOUR AU - Wang, X. AU - Zheng, Z. AU - Cai, Y. AU - Chen, T. AU - Li, C. AU - Fu, W. PY - 2017 DA - 2017// TI - CNVcaller: highly efficient and widely applicable software for detecting copy number variations in large populations JO - Gigascience. VL - 6 UR - https://doi.org/10.1093/gigascience/gix089 DO - 10.1093/gigascience/gix089 ID - Wang2017 ER - TY - JOUR AU - Abyzov, A. AU - Urban, A. E. AU - Snyder, M. AU - Gerstein, M. PY - 2011 DA - 2011// TI - CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing JO - Genome Res VL - 21 UR - https://doi.org/10.1101/gr.114876.110 DO - 10.1101/gr.114876.110 ID - Abyzov2011 ER - TY - JOUR AU - Purcell, S. AU - Neale, B. AU - Todd-Brown, K. AU - Thomas, L. AU - Ferreira, M. A. AU - Bender, D. PY - 2007 DA - 2007// TI - PLINK: a tool set for whole-genome association and population-based linkage analyses JO - Am J Hum Genet VL - 81 UR - https://doi.org/10.1086/519795 DO - 10.1086/519795 ID - Purcell2007 ER - TY - JOUR AU - Browning, S. R. AU - Browning, B. L. PY - 2007 DA - 2007// TI - Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering JO - Am J Hum Genet VL - 81 UR - https://doi.org/10.1086/521987 DO - 10.1086/521987 ID - Browning2007 ER - TY - JOUR AU - VanRaden, P. M. PY - 2008 DA - 2008// TI - Efficient methods to compute genomic predictions JO - J Dairy Sci VL - 91 UR - https://doi.org/10.3168/jds.2007-0980 DO - 10.3168/jds.2007-0980 ID - VanRaden2008 ER - TY - BOOK AU - Chen, C. AU - Xia, R. AU - Chen, H. AU - YJB, H. PY - 2018 DA - 2018// TI - TBtools, a Toolkit for Biologists integrating various biological data handling tools with a user-friendly interface ID - Chen2018 ER - TY - JOUR AU - He, Z. AU - Zhang, H. AU - Gao, S. AU - Lercher, M. J. AU - Chen, W. H. AU - Hu, S. PY - 2016 DA - 2016// TI - Evolview v2: an online visualization and management tool for customized and annotated phylogenetic trees JO - Nucleic Acids Res VL - 44 UR - https://doi.org/10.1093/nar/gkw370 DO - 10.1093/nar/gkw370 ID - He2016 ER - TY - JOUR AU - Burch, B. D. AU - Iyer, H. K. PY - 1997 DA - 1997// TI - Exact confidence intervals for a variance ratio (or heritability) in a mixed linear model JO - Biometrics. VL - 53 UR - https://doi.org/10.2307/2533500 DO - 10.2307/2533500 ID - Burch1997 ER - TY - JOUR AU - Otasek, D. AU - Morris, J. H. AU - Boucas, J. AU - Pico, A. R. AU - Demchak, B. PY - 2019 DA - 2019// TI - Cytoscape automation: empowering workflow-based network analysis JO - Genome Biol VL - 20 UR - https://doi.org/10.1186/s13059-019-1758-4 DO - 10.1186/s13059-019-1758-4 ID - Otasek2019 ER - TY - JOUR AU - Nonneman, D. J. AU - Schneider, J. F. AU - Lents, C. A. AU - Wiedmann, R. T. AU - Vallet, J. L. AU - Rohrer, G. A. PY - 2016 DA - 2016// TI - Genome-wide association and identification of candidate genes for age at puberty in swine JO - BMC Genet VL - 17 UR - https://doi.org/10.1186/s12863-016-0352-y DO - 10.1186/s12863-016-0352-y ID - Nonneman2016 ER - TY - JOUR AU - Meirmans, P. G. AU - Hedrick, P. W. PY - 2011 DA - 2011// TI - Assessing population structure: F (ST) and related measures JO - Mol Ecol Resour VL - 11 UR - https://doi.org/10.1111/j.1755-0998.2010.02927.x DO - 10.1111/j.1755-0998.2010.02927.x ID - Meirmans2011 ER - TY - JOUR AU - Chen, G. B. AU - Lee, S. H. AU - Zhu, Z. X. AU - Benyamin, B. AU - Robinson, M. R. PY - 2016 DA - 2016// TI - EigenGWAS: finding loci under selection through genome-wide association studies of eigenvectors in structured populations JO - Heredity (Edinb) VL - 117 UR - https://doi.org/10.1038/hdy.2016.25 DO - 10.1038/hdy.2016.25 ID - Chen2016 ER - TY - JOUR AU - Fang, L. AU - Wang, Q. AU - Hu, Y. AU - Jia, Y. AU - Chen, J. AU - Liu, B. PY - 2017 DA - 2017// TI - Genomic analyses in cotton identify signatures of selection and loci associated with fiber quality and yield traits JO - Nat Genet VL - 49 UR - https://doi.org/10.1038/ng.3887 DO - 10.1038/ng.3887 ID - Fang2017 ER - TY - JOUR AU - Zhou, Z. AU - Li, M. AU - Cheng, H. AU - Fan, W. AU - Yuan, Z. AU - Gao, Q. PY - 2018 DA - 2018// TI - An intercross population study reveals genes associated with body size and plumage color in ducks JO - Nat Commun VL - 9 UR - https://doi.org/10.1038/s41467-018-04868-4 DO - 10.1038/s41467-018-04868-4 ID - Zhou2018 ER - TY - JOUR AU - Plassais, J. AU - Kim, J. AU - Davis, B. W. AU - Karyadi, D. M. AU - Hogan, A. N. AU - Harris, A. C. PY - 2019 DA - 2019// TI - Whole genome sequencing of canids reveals genomic regions under selection and variants influencing morphology JO - Nat Commun VL - 10 UR - https://doi.org/10.1038/s41467-019-09373-w DO - 10.1038/s41467-019-09373-w ID - Plassais2019 ER - TY - JOUR AU - Marklund, S. AU - Kijas, J. AU - Rodriguez-Martinez, H. AU - Ronnstrand, L. AU - Funa, K. AU - Moller, M. PY - 1998 DA - 1998// TI - Molecular basis for the dominant white phenotype in the domestic pig JO - Genome Res VL - 8 UR - https://doi.org/10.1101/gr.8.8.826 DO - 10.1101/gr.8.8.826 ID - Marklund1998 ER - TY - JOUR AU - Marklund, S. AU - Moller, M. AU - Sandberg, K. AU - Andersson, L. PY - 1999 DA - 1999// TI - Close association between sequence polymorphism in the KIT gene and the roan coat color in horses JO - Mamm Genome VL - 10 UR - https://doi.org/10.1007/s003359900987 DO - 10.1007/s003359900987 ID - Marklund1999 ER - TY - JOUR AU - Brooks, S. A. AU - Bailey, E. PY - 2005 DA - 2005// TI - Exon skipping in the KIT gene causes a Sabino spotting pattern in horses JO - Mamm Genome VL - 16 UR - https://doi.org/10.1007/s00335-005-2472-y DO - 10.1007/s00335-005-2472-y ID - Brooks2005 ER - TY - JOUR AU - Fontanesi, L. AU - Tazzoli, M. AU - Russo, V. AU - Beever, J. PY - 2010 DA - 2010// TI - Genetic heterogeneity at the bovine KIT gene in cattle breeds carrying different putative alleles at the spotting locus JO - Anim Genet VL - 41 UR - https://doi.org/10.1111/j.1365-2052.2009.02007.x DO - 10.1111/j.1365-2052.2009.02007.x ID - Fontanesi2010 ER - TY - JOUR AU - Johansson, M. AU - Ellegren, H. AU - Marklund, L. AU - Gustavsson, U. AU - Ringmar-Cederberg, E. AU - Andersson, K. PY - 1992 DA - 1992// TI - The gene for dominant white color in the pig is closely linked to ALB and PDGRFRA on chromosome 8 JO - Genomics. VL - 14 UR - https://doi.org/10.1016/S0888-7543(05)80118-1 DO - 10.1016/S0888-7543(05)80118-1 ID - Johansson1992 ER - TY - JOUR AU - Meszaros, G. AU - Petautschnig, E. AU - Schwarzenbacher, H. AU - Solkner, J. PY - 2015 DA - 2015// TI - Genomic regions influencing coat color saturation and facial markings in Fleckvieh cattle JO - Anim Genet VL - 46 UR - https://doi.org/10.1111/age.12249 DO - 10.1111/age.12249 ID - Meszaros2015 ER - TY - JOUR AU - Hanna, L. L. AU - Sanders, J. O. AU - Riley, D. G. AU - Abbey, C. A. AU - Gill, C. A. PY - 2014 DA - 2014// TI - Identification of a major locus interacting with MC1R and modifying black coat color in an F (2) Nellore-Angus population JO - Genet Sel Evol VL - 46 UR - https://doi.org/10.1186/1297-9686-46-4 DO - 10.1186/1297-9686-46-4 ID - Hanna2014 ER - TY - JOUR AU - Yang, Y. AU - Adeola, A. C. AU - Xie, H. B. AU - Zhang, Y. P. PY - 2018 DA - 2018// TI - Genomic and transcriptomic analyses reveal selection of genes for puberty in Bama Xiang pigs JO - Zool Res VL - 39 UR - https://doi.org/10.24272/j.issn.2095-8137.2018.068 DO - 10.24272/j.issn.2095-8137.2018.068 ID - Yang2018 ER - TY - JOUR AU - Wang, C. AU - Wang, H. Y. AU - Zhang, Y. AU - Tang, Z. L. AU - Li, K. AU - Liu, B. PY - 2015 DA - 2015// TI - Genome-wide analysis reveals artificial selection on coat colour and reproductive traits in Chinese domestic pigs JO - Mol Ecol Resour VL - 15 UR - https://doi.org/10.1111/1755-0998.12311 DO - 10.1111/1755-0998.12311 ID - Wang2015 ER - TY - STD TI - Ai H, Huang L, Ren J. Genetic diversity, linkage disequilibrium and selection signatures in chinese and Western pigs revealed by genome-wide SNP markers. PLoS One. 2013;8:e56001. ID - ref44 ER - TY - JOUR AU - Takeda, K. AU - Hozumi, H. AU - Nakai, K. AU - Yoshizawa, M. AU - Satoh, H. AU - Yamamoto, H. PY - 2014 DA - 2014// TI - Insertion of long interspersed element-1 in the Mitf gene is associated with altered neurobehavior of the black-eyed white Mitf (mi-bw) mouse JO - Genes Cells VL - 19 UR - https://doi.org/10.1111/gtc.12117 DO - 10.1111/gtc.12117 ID - Takeda2014 ER - TY - JOUR AU - Yamada, T. AU - Ohtani, S. AU - Sakurai, T. AU - Tsuji, T. AU - Kunieda, T. AU - Yanagisawa, M. PY - 2006 DA - 2006// TI - Reduced expression of the endothelin receptor type B gene in piebald mice caused by insertion of a retroposon-like element in intron 1 JO - J Biol Chem VL - 281 UR - https://doi.org/10.1074/jbc.M512618200 DO - 10.1074/jbc.M512618200 ID - Yamada2006 ER - TY - JOUR AU - Okumura, N. AU - Matsumoto, T. AU - Hamasima, N. AU - Awata, T. PY - 2008 DA - 2008// TI - Single nucleotide polymorphisms of the KIT and KITLG genes in pigs JO - Anim Sci J VL - 79 UR - https://doi.org/10.1111/j.1740-0929.2008.00531.x DO - 10.1111/j.1740-0929.2008.00531.x ID - Okumura2008 ER - TY - JOUR AU - Guyonneau, L. AU - Murisier, F. AU - Rossier, A. AU - Moulin, A. AU - Beermann, F. PY - 2004 DA - 2004// TI - Melanocytes and pigmentation are affected in dopachrome tautomerase knockout mice JO - Mol Cell Biol VL - 24 UR - https://doi.org/10.1128/MCB.24.8.3396-3403.2004 DO - 10.1128/MCB.24.8.3396-3403.2004 ID - Guyonneau2004 ER - TY - JOUR AU - McEvoy, B. AU - Beleza, S. AU - Shriver, M. D. PY - 2006 DA - 2006// TI - The genetic architecture of normal variation in human pigmentation: an evolutionary perspective and model JO - Hum Mol Genet VL - 15 UR - https://doi.org/10.1093/hmg/ddl217 DO - 10.1093/hmg/ddl217 ID - McEvoy2006 ER - TY - STD TI - Zhang Y, Liang J, Zhang L, Wang L, Liu X, Yan H, et al. Porcine methionine sulfoxide reductase B3: molecular cloning, tissue-specific expression profiles, and polymorphisms associated with ear size in Sus scrofa. J Anim Sci Biotechnol. 2015;6:60. ID - ref50 ER - TY - JOUR AU - Li, P. H. AU - Xiao, S. J. AU - Wei, N. AU - Zhang, Z. Y. AU - Huang, R. H. AU - Gu, Y. Q. PY - 2012 DA - 2012// TI - Fine mapping of a QTL for ear size on porcine chromosome 5 and identification of high mobility group AT-hook 2 (HMGA2) as a positional candidate gene JO - Genet Sel Evol VL - 44 UR - https://doi.org/10.1186/1297-9686-44-6 DO - 10.1186/1297-9686-44-6 ID - Li2012 ER - TY - JOUR AU - Zhang, L. C. AU - Liang, J. AU - Luo, W. Z. AU - Liu, X. AU - Yan, H. AU - Zhao, K. B. PY - 2014 DA - 2014// TI - Genome-wide scan reveals LEMD3 and WIF1 on SSC5 as the candidates for porcine ear size JO - PLoS One VL - 9 UR - https://doi.org/10.1371/journal.pone.0102085 DO - 10.1371/journal.pone.0102085 ID - Zhang2014 ER - TY - JOUR AU - Wilkinson, S. AU - Lu, Z. H. AU - Megens, H. J. AU - Archibald, A. L. AU - Haley, C. AU - Jackson, I. J. PY - 2013 DA - 2013// TI - Signatures of diversifying selection in European pig breeds JO - PLoS Genet VL - 9 UR - https://doi.org/10.1371/journal.pgen.1003453 DO - 10.1371/journal.pgen.1003453 ID - Wilkinson2013 ER - TY - JOUR AU - Macsai, C. E. AU - Foster, B. K. AU - Xian, C. J. PY - 2008 DA - 2008// TI - Roles of Wnt signalling in bone growth, remodelling, skeletal disorders and fracture repair JO - J Cell Physiol VL - 215 UR - https://doi.org/10.1002/jcp.21342 DO - 10.1002/jcp.21342 ID - Macsai2008 ER - TY - JOUR AU - Ren, J. AU - Duan, Y. AU - Qiao, R. AU - Yao, F. AU - Zhang, Z. AU - Yang, B. PY - 2011 DA - 2011// TI - A missense mutation in PPARD causes a major QTL effect on ear size in pigs JO - PLoS Genet VL - 7 UR - https://doi.org/10.1371/journal.pgen.1002043 DO - 10.1371/journal.pgen.1002043 ID - Ren2011 ER - TY - JOUR AU - Zhang, Z. AU - Duan, Y. Y. AU - Wu, Z. P. AU - Zhang, H. AU - Ren, J. AU - Huang, L. S. PY - 2017 DA - 2017// TI - PPARD is an inhibitor of cartilage growth in external ears JO - Int J Biol Sci VL - 13 UR - https://doi.org/10.7150/ijbs.19714 DO - 10.7150/ijbs.19714 ID - Zhang2017 ER - TY - JOUR AU - Boyko, A. R. AU - Quignon, P. AU - Li, L. AU - Schoenebeck, J. J. AU - Degenhardt, J. D. AU - Lohmueller, K. E. PY - 2010 DA - 2010// TI - A simple genetic architecture underlies morphological variation in dogs JO - PLoS Biol VL - 8 UR - https://doi.org/10.1371/journal.pbio.1000451 DO - 10.1371/journal.pbio.1000451 ID - Boyko2010 ER - TY - JOUR AU - Vaysse, A. AU - Ratnakumar, A. AU - Derrien, T. AU - Axelsson, E. AU - Rosengren Pielberg, G. AU - Sigurdsson, S. PY - 2011 DA - 2011// TI - Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping JO - PLoS Genet VL - 7 UR - https://doi.org/10.1371/journal.pgen.1002316 DO - 10.1371/journal.pgen.1002316 ID - Vaysse2011 ER - TY - STD TI - Chen C, Liu C, Xiong X, Fang S, Yang H, Zhang Z, et al. Copy number variation in the MSRB3 gene enlarges porcine ear size through a mechanism involving miR-584-5p. Genet Sel Evol. 2018;50:72. ID - ref59 ER - TY - STD TI - Zhang LC, Li N, Liu X, Liang J, Yan H, Zhao KB, et al. A genome-wide association study of limb bone length using a Large White × Minzhu intercross population. Genet Sel Evol. 2014;46:56. ID - ref60 ER - TY - JOUR AU - Allen, H. L. AU - Estrada, K. AU - Lettre, G. AU - Berndt, S. I. AU - Weedon, M. N. AU - Rivadeneira, F. PY - 2010 DA - 2010// TI - Hundreds of variants clustered in genomic loci and biological pathways affect human height JO - Nature. VL - 467 UR - https://doi.org/10.1038/nature09410 DO - 10.1038/nature09410 ID - Allen2010 ER - TY - STD TI - Wang L, Zhang L, Yan H, Liu X, Li N, Liang J, et al. Genome-wide association studies identify the loci for 5 exterior traits in a Large White x Minzhu pig population. PLoS One. 2014;9:e103766. ID - ref62 ER - TY - STD TI - Le TH, Christensen OF, Nielsen B, Sahana G. Genome-wide association study for conformation traits in three Danish pig breeds. Genet Sel Evol. 2017;49:12. ID - ref63 ER - TY - JOUR AU - Mercade, A. AU - Estelle, J. AU - Perez-Enciso, M. AU - Varona, L. AU - Silio, L. AU - Noguera, J. L. PY - 2006 DA - 2006// TI - Characterization of the porcine acyl-CoA synthetase long-chain 4 gene and its association with growth and meat quality traits JO - Anim Genet VL - 37 UR - https://doi.org/10.1111/j.1365-2052.2006.01436.x DO - 10.1111/j.1365-2052.2006.01436.x ID - Mercade2006 ER - TY - STD TI - Ma J, Gilbert H, Iannuccelli N, Duan Y, Guo B, Huang W, et al. Fine mapping of fatness QTL on porcine chromosome X and analyses of three positional candidate genes. BMC Genet. 2013;14:46. ID - ref65 ER - TY - JOUR AU - Cepica, S. AU - Bartenschlager, H. AU - Geldermann, H. PY - 2007 DA - 2007// TI - Mapping of QTL on chromosome X for fat deposition, muscling and growth traits in a wild boar x Meishan F-2 family using a high-density gene map JO - Anim Genet VL - 38 UR - https://doi.org/10.1111/j.1365-2052.2007.01661.x DO - 10.1111/j.1365-2052.2007.01661.x ID - Cepica2007 ER - TY - STD TI - Plassais J, Rimbault M, Williams FJ, Davis BW, Schoenebeck JJ, Ostrander EA. Analysis of large versus small dogs reveals three genes on the canine X chromosome associated with body weight, muscling and back fat thickness. PLoS Genet. 2017;13:e1006661. ID - ref67 ER - TY - JOUR AU - Solberg, A. AU - Robertson, A. B. AU - Aronsen, J. M. AU - Rognmo, O. AU - Sjaastad, I. AU - Wisloff, U. PY - 2013 DA - 2013// TI - Deletion of mouse Alkbh7 leads to obesity JO - J Mol Cell Biol VL - 5 UR - https://doi.org/10.1093/jmcb/mjt012 DO - 10.1093/jmcb/mjt012 ID - Solberg2013 ER - TY - STD TI - Wang TJ, Feugang JM, Crenshaw MA, Regmi N, Blanton JR, Liao SFF. A systems biology approach using Transcriptomic data reveals genes and pathways in porcine skeletal muscle affected by dietary lysine. Int J Mol Sci. 2017;18(4):885. ID - ref69 ER - TY - JOUR AU - Qiao, R. AU - Gao, J. AU - Zhang, Z. AU - Li, L. AU - Xie, X. AU - Fan, Y. PY - 2015 DA - 2015// TI - Genome-wide association analyses reveal significant loci and strong candidate genes for growth and fatness traits in two pig populations JO - Genet Sel Evol VL - 47 UR - https://doi.org/10.1186/s12711-015-0089-5 DO - 10.1186/s12711-015-0089-5 ID - Qiao2015 ER - TY - JOUR AU - Rubin, C. J. AU - Megens, H. J. AU - Martinez Barrio, A. AU - Maqbool, K. AU - Sayyab, S. AU - Schwochow, D. PY - 2012 DA - 2012// TI - Strong signatures of selection in the domestic pig genome JO - Proc Natl Acad Sci U S A VL - 109 UR - https://doi.org/10.1073/pnas.1217149109 DO - 10.1073/pnas.1217149109 ID - Rubin2012 ER - TY - STD TI - Metzger J, Schrimpf R, Philipp U, Distl O. Expression levels of LCORL are associated with body size in horses. PLoS One. 2013;8:e56497. ID - ref72 ER - TY - STD TI - Lindholm-Perry AK, Sexten AK, Kuehn LA, Smith TPL, King DA, Shackelford SD, et al. Association, effects and validation of polymorphisms within the NCAPG - LCORL locus located on BTA6 with feed intake, gain, meat and carcass traits in beef cattle. BMC Genetics. 2011;12:103. ID - ref73 ER - TY - JOUR AU - Edea, Z. AU - Hong, J. K. AU - Jung, J. H. AU - Kim, D. W. AU - Kim, Y. M. AU - Kim, E. S. PY - 2017 DA - 2017// TI - Detecting selection signatures between Duroc and Duroc synthetic pig populations using high-density SNP chip JO - Anim Genet VL - 48 UR - https://doi.org/10.1111/age.12559 DO - 10.1111/age.12559 ID - Edea2017 ER - TY - JOUR AU - Fontanesi, L. AU - Schiavo, G. AU - Galimberti, G. AU - Calo, D. G. AU - Russo, V. PY - 2014 DA - 2014// TI - A genomewide association study for average daily gain in Italian large white pigs JO - J Anim Sci VL - 92 UR - https://doi.org/10.2527/jas.2013-7059 DO - 10.2527/jas.2013-7059 ID - Fontanesi2014 ER - TY - STD TI - Kim J, Lee T, Kim TH, Lee KT, Kim H. An integrated approach of comparative genomics and heritability analysis of pig and human on obesity trait: evidence for candidate genes on human chromosome 2. BMC Genomics. 2012;13:711. ID - ref76 ER -