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Table 5 The differential bacteria among CON, AGP, and ABP identified using the Mann-Whitney U test

From: A novel apidaecin Api-PR19 synergizes with the gut microbial community to maintain intestinal health and promote growth performance of broilers

Bacteria ABP AGP log2FC Wilcox.test. P-value
ABP vs. AGP
 Phylum
  Proteobacteria 0.5614 1.4075 − 1.33 0.0472
 Class
  Deltaproteobacteria 0.3681 0.7903 −1.1 0.0472
 Family
  Bacillaceae 2 0 0.0147 -Inf 0.0186
  Eubacteriaceae 4.1316 1.5342 1.43 0.0283
  Christensenellaceae 0.1028 0.0456 1.17 0.0283
  Acidaminococcaceae 0.0866 0.2892 −1.74 0.0472
  Gracilibacteraceae 0.0062 0.0027 1.2 0.0472
 Genus
Christensenella 0.083 0.0272 1.61 0.009
Bacillaceae 2 unclassified 0 0.0147 -Inf 0.0186
Bacillus 0 0.0038 -Inf 0.0186
Faecalibacterium 3.2023 9.9469 −1.64 0.0283
Eubacterium 4.1152 1.525 1.43 0.0283
Tyzzerella 0.0005 0.0069 −3.79 0.0343
Gracilibacter 0.0062 0.0027 1.2 0.0472
 Species
Uncultured Christensenella sp. 0.0547 0.0097 2.5 0.0163
Bacillaceae 2 unclassified 0 0.0147 -Inf 0.0186
Bacillus sp. CW27-B01 0 0.0038 -Inf 0.0186
Anaeromassilibacillus sp. Marseille-P4683 0.0004 0.0037 −3.21 0.0236
Uncultured Eubacterium sp. 4.1146 1.5238 1.43 0.0283
Clostridium colinum 0.0005 0.0069 −3.79 0.0343
Faecalibacterium prausnitzii 1.82 5.116 −1.49 0.0472
Alistipes unclassified 3.8294 1.5695 1.29 0.0472
Uncultured Gracilibacter sp. 0.0062 0.0027 1.2 0.0472
ABP vs. CON
 Family
  Prevotellaceae 0 0.0496 -Inf 0.0186
 Genus
Holdemania 0.0189 0.0618 −1.71 0.009
Tyzzerella 0.0005 0.0199 −5.31 0.0132
Prevotella 0 0.0496 -Inf 0.0186
 Species
Anaeromassilibacillus sp. Marseille-P4683 0.0004 0.0084 −4.39 0.0071
Holdemania filiformis 0.0189 0.0618 −1.71 0.009
Clostridium colinum 0.0005 0.0199 −5.31 0.0132
Clostridium asparagiforme 0.0064 0.0007 3.19 0.016
Prevotella lascolaii 0 0.0496 -Inf 0.0186
Helicobacter cf. pullorum 0 0.0028 -Inf 0.0186
Uncultured Christensenella sp. 0.0547 0.0129 2.08 0.0283
AGP vs. CON
 Family
  Bacillaceae 2 0.0147 0 Inf 0.0186
  Christensenellaceae 0.0456 0.0714 −0.65 0.0472
 Genus
Bacillaceae 2 unclassified 0.0147 0 Inf 0.0186
Bacillus 0.0038 0.0001 5.25 0.0343
 Species
Parasutterella secunda 0 0.0668 -Inf 0.0186
Bacillaceae 2 unclassified 0.0147 0 Inf 0.0186
Clostridium sp. enrichment culture clone 06–1,235,251-143 0.0032 0.001 1.68 0.0278
Sporobacter termitidis 0.2204 0.8674 −1.98 0.0283
Bacillus sp. CW27-B01 0.0038 0.0001 5.25 0.0343
Uncultured Peptococcus sp. 0.0056 0.0285 −2.35 0.0472
  1. Note: CON indicates control group; ABP indicates Api-PR19 group; AGP indicates enramycin (antibiotic) group; -inf negative infinity; inf positive infinity