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Table 4 Effects of haplotypes and diplotypes located within the most significant region on chromosome 19 on milk traits in New Zealand dairy goats

From: Genome-wide association studies of lactation yields of milk, fat, protein and somatic cell score in New Zealand dairy goats

  Milk yield, kg Fat yield, kg Protein yield, kg SCSa,
units
Haplotypes
 h1 73.6 (3.1)b 2.15 (0.11)b 1.91 (0.09)b 0.16 (0.02)b
 h2 −57.0 (4.1)b −1.87 (0.14)b −1.54 (0.12)b −0.08 (0.02)b
 h3 −28.7 (5.6)b −0.59 (0.19)c −0.68 (0.16)b −0.20 (0.03)b
 h4 −59.1 (6.9)b − 1.62 (0.24)b − 1.64 (0.20)b − 0.12 (0.04)b
 h5 −70.0 (7.9)b − 2.24 (0.27)b − 1.89 (0.23)b − 0.10 (0.04)c
 h6 −5.7 (7.7) − 0.10 (0.26) − 0.07 (0.22) − 0.06 (0.04)
 h7 − 107.6 (20.9)b −3.59 (0.72)b − 2.58 (0.61)c − 0.07 (0.11)
 h8 −43.4 (18.9)c −2.24 (0.65)b −1.92 (0.55)c 0.01 (0.10)
 h9 7.8 (13.1) 1.49 (0.45)b 1.04 (0.38)c −0.02 (0.07)
 h10 −44.7 (21.7)c −2.15 (0.75)c −1.05 (0.64) 0.16 (0.12)
Diplotypes
 h1-h0 53.4 (4.1)b 1.88 (0.14)b 1.61 (0.12)b −0.18 (0.02)b
 h1-h1 103.6 (3.8)b 3.10 (0.13)b 2.75 (0.11)b 0.05 (0.02)c
 h1-h2 42.4 (4.6)b 1.17 (0.16)b 1.21 (0.14)b −0.11 (0.02)b
 h2-h0 −58.0 (6.9)b −1.49 (0.24)b −1.44 (0.20)b −0.17 (0.04)b
 h2-h2 −45.9 (13.5)b −1.83 (0.47)b −1.33 (0.40)b −0.41 (0.07)b
 h0-h0 −37.3 (8.4)b −1.08 (0.29)b −0.93 (0.25)b −0.32 (0.04)b
  1. aSCS somatic cell score
  2. bP < 0.001, cP < 0.05