Table 2 List of genomic regions of extended homozygosity detected in the Large White pig population within each ROH island
Chr. | Start, bp | End, bp | Length, bp | No. SNPs | No. Genes |
|---|---|---|---|---|---|
1 | 45,159,055 | 45,580,780 | 421,725 | 4 | 3 |
1 | 46,051,365 | 46,251,692 | 200,327 | 4 | 1 |
1 | 47,215,836 | 49,995,943 | 2,780,107 | 50 | 3 |
1 | 66,162,636 | 67,278,674 | 1,116,038 | 18 | 9 |
4 | 96,116,417 | 102,143,358 | 6,026,941 | 107 | 158 |
4 | 102,523,866 | 102,618,589 | 94,723 | 3 | 1 |
4 | 104,299,568 | 104,397,592 | 98,024 | 3 | 2 |
4 | 106,857,958 | 107,236,227 | 378,269 | 12 | 2 |
6 | 26,918,929 | 31,001,440 | 4,082,511 | 71 | 86 |
14 | 44,919,089 | 45,412,495 | 493,406 | 13 | 3 |
14 | 47,355,668 | 47,467,063 | 111,395 | 3 | 5 |
14 | 68,649,520 | 73,203,453 | 4,553,933 | 70 | 35 |