Table 2 Simulation parameters of the genome
Genome | Values |
|---|---|
Number of chromosomes | 5 |
Chromosome length | 100 cM |
Number of marker loci on one chromosome | 1,000,000 |
Marker positions | Evenly |
Number of marker alleles in the first HG | 2 |
Marker allele frequencies in the first HG | Random |
Number of QTL loci on one chromosome | 100 |
QTL positions | Random |
Number of QTL alleles in the first HG | 2 |
QTL allele frequencies in the first HG | Random |
QTL allele effect | From a gamma distribution with a shape of 0.4 |
Marker mutation rate in historical population | 2.5 × 10−5 |
QTL mutation rate in historical population | 2.5 × 10−5 |