Sample | Raw data | Valid data | Valid ratio, % | Q20, % | Q30, % | GC content, % | ||
---|---|---|---|---|---|---|---|---|
Read | Base | Read | Base | |||||
PE1 | 120,000,000 | 18.00G | 97,237,044 | 14.59G | 81.03 | 99.48 | 94.62 | 49 |
PE2 | 120,000,000 | 18.00G | 90,947,840 | 13.64G | 75.79 | 99.44 | 94.36 | 52.5 |
RE1 | 120,000,000 | 18.00G | 93,492,408 | 14.02G | 77.91 | 99.33 | 93.68 | 50 |
RE2 | 120,000,000 | 18.00G | 94,273,656 | 14.14G | 78.56 | 99.41 | 93.82 | 51 |