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Table 1 Alignment of clean reads of DNA and RNA samples

From: Genome-wide profiling of RNA editing sites in sheep

Alignment

DNA

Kidney RNA

Spleen RNA

Raw reads

MQ > 20

Raw reads

Uniquely mapped

Raw reads

Uniquely mapped

IND1

228,494,214

85.81%

84,918,643

52.63%

71,544,583

56.74%

IND2

310,038,163

87.75%

78,384,278

48.53%

68,023,085

54.89%

IND3

227,778,931

86.23%

82,092,796

54.92%

73,439,711

57.89%