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Table 3 Genotypic and allelic frequencies for each SNP in total population of goats

From: Single nucleotide polymorphisms in candidate genes are significantly associated with resistance to Haemonchus contortus infection in goats

SNP Genotypic frequencies Allele frequencies
CIITA_161_C > T CC CT TT C 0.99
0.98 0.02 0.002 T 0.01
CIITA_481_A > T AA AT TT A 0.01
0.004 0.02 0.98 T 0.99
HSPA8_1024_A > G AA AG GG A 0.18
0.04 0.27 0.69 G 0.82
HSPA8_1064_A > G AA AG GG A 0.80
0.65 0.27 0.04 G 0.20
ESYT1_559_G > C GG GC CC C 0.14
0.75 0.22 0.03 G 0.86
STAT5B_197_A > G AA AG GG A 0.52
0.29 0.45 0.26 G 0.48
SERPING1_312_C > T CC CT TT C 0.76
0.58 0.37 0.05 T 0.24
SERPING1_615_G > T GG GT TT G 0.74
0.58 0.37 0.05 T 0.24
ATP2A3_150_A > G AA AG GG A 0.27
0.12 0.31 0.57 G 0.73
ATP2A3_680_A > C AA AC CC A 0.74
0.58 0.33 0.09 C 0.26