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Table 1 Differentially expressed lncRNAs (log2FC ≥ 1)a identified in porcine granulosa cells after 3, 12 or 24 h of TCDD treatment

From: Identification and characterization of long non-coding RNAs in porcine granulosa cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin

No.

Identified lncRNA

lncRNA XLOC

lncRNA locus

log2FC

3 h

12 h

24 h

1

TCONS_00005658

XLOC_002986

10:777270–897286

Infb

–

–

2

TCONS_00006290

XLOC_003288

7:63840034–63853541

3.34

–

–

3

TCONS_00006291

XLOC_003288

10:78713507–78719836

3.32

–

–

4

TCONS_00016901

XLOC_008756

14:120019330–120022623

Inf

–

Inf

5

TCONS_00034713

XLOC_017807

3:108221745–108230820

1.76

1.64

2.32

6

TCONS_00034978

XLOC_017941

3:138550166–138568232

1.16

–

–

7

TCONS_00038918

XLOC_019982

5:6915996–7133894

1.34

–

–

8

TCONS_00040607

XLOC_020835

5:23100502–23101339

2.07

–

–

9

TCONS_00041714

XLOC_021448

6:3237107–3238658

3.77

–

–

10

TCONS_00048979

XLOC_024965

7:3272029–3276056

Inf

–

–

11

TCONS_00053619

XLOC_027505

9:32511923–32566577

1.51

–

–

12

TCONS_00056190

XLOC_028876

9:146755972–146762016

2.08

–

–

13

TCONS_00060223

XLOC_031885

GL895718.2:3829–4611

Inf

–

–

14

TCONS_00064401

XLOC_034330

X:123166327–123167560

Inf

–

–

15

TCONS_00064964

XLOC_034502

X:14951320–15305754

3.40

–

–

16

TCONS_00007818

XLOC_004159

11:18740477–18860373

–

1.09

–

17

TCONS_00020891

XLOC_010641

15:71337144–71348412

–

0.99

–

18

TCONS_00031035

XLOC_015924

2:160084074–160102520

–

1.34

2.68

19

TCONS_00008517

XLOC_004581

12:6857198–6863409

–

–

2.06

20

TCONS_00030731

XLOC_015756

2:143856229–143907415

–

–

−0.99

21

TCONS_00031038

XLOC_015924

2:160084074–160102520

–

–

2.31

22

TCONS_00048132

XLOC_024540

7:63840034–63853541

–

–

−1.01

  1. alog2FC – log2 fold change
  2. bInf – transcript expression was not detected in control (untreated) cells