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Table 1 Sequences of bovine oligonucleotide primers used for real-time reverse transcription PCR

From: Residual feed intake phenotype and gender affect the expression of key genes of the lipogenesis pathway in subcutaneous adipose tissue of beef cattle

Gene symbol

Accession numbera

Primer sequence (5′ →3′)b

SLC2A4 d

NM_174604.1

F: GGGACTGGTACCCATGTACG

R: AGGAGGAGTGGCCATAAGGT

ACAT1 d

NM_001046075.1

F: TCAACGGAGGAGCTGTTTCT

R: TGCAAATACTGGCAAGACCA

HMGCoAS d

NM_001045883.1

F: AGAACGTCTGCCCTCTTTCA

F: TACAAGGCTGCTGTGTCCAG

SREBP1c d

NM_001113302.1

F: CTACATCCGCTTCCTTCAGC

R: TTCAGCGATTTGCTTTTGTG

FASN d

NM_001012669.1

F: TCATCCCCCTGATGAAGAAG

R: AACTCCACAGGTGGGAACAG

ACLY d

NM_001037457.1

F: CAAGAAGGCAGACCAGAAGG

R: CTGGGCGGTACAGCTTAGAG

ELOVL6 d

NM_001102155.1

F: GGAAAGCAACGAAAGCTGAC

R: TGGGTTGTGTGTTTGCTCAT

SCD d

NM_173959.4

F: CGACGTGGCTTTTTCTTCTC

R: GATACCATGGCACGAGTGTG

ACACA d

NM_174224.2

F: TGTCCGAAACGTCGATTTTTG

R: ACGACCTGGTTGCTGTGATAGA

HMGCoAR d

NM_001105613.1

F: TGAGGGAGAACATTGCTCGT

R: ACATGATTTCGAGCTGACGC

RFLPO c

NM_001012682

F: CAACCCTGAAGTGCTTGACAT

R: AGGCAGATGGATCAGCCA

UTX2 c

NM_001037471

F: TGTGGCCCTTGGATATGGTT

R: GGTTGTCGCTGAGCTCTGTG

TPB c

NM_001075742

F: CCTAAAGACCATTGCACTTCG

R: CTTCACTCTTGGCTCCTGTG

TOP2B c

XM_001254709

F: CCGATGATGATGACGACAAT

R: TGCTATGGGAGATGCTTTGA

B-actin c

U39357

F: CTCACGGAGCGTGGCTACA

R: GCCATCTCCTGCTCGAAGTC

  1. aAccession number in the National Centre for Biotechnology Information database (www.ncbi.nlm.nih/gov/gene)
  2. bF forward primer, R reverse primer
  3. cGenes used for as reference for qPCR normalisation; RFLPO, Ribosomal protein large PO; UTX2, Ubiquitously expressed transcript; TPB, TATA box-binding protein; Topoisomerase II-beta TOP2B, β-actin
  4. dTarget genes; SLC2A4 solute carrier family 2 member 4, ACAT1 Acetyl-CoA Acetyltransferase 1, HMGCoAS Hydroxymethylglutaryl CoA synthase, SREBP1c Sterol regulatory element-binding protein, FASN Fatty acid synthase, ACLY Acetyl citrate lyase, ELOVL6 Fatty acid elongase 6, SCD Stearoyl-CoA desaturase-1, ACACA Acetyl-CoA carboxylase, HMGCoAR Hydroxymethylglutaryl CoA reductase