Table 4 Genotypes and allele frequency of six SNPs in the random local population
From: Molecular cloning and characterization of the endothelin 3 gene in black bone sheep
SNP ID | Breed | Number of samples to each genotype (Genotype frequency, %) | Allele frequency | Fisher’s exact test (P value) | |||
|---|---|---|---|---|---|---|---|
| Â | Â | TT | TC | CC | T | C | Â |
g. 61276174C > T | Non-black | 19 (87.50) | 3(12.50) | 0 | 0.93 | 0.07 | 0.19 |
| Â | Black | 80(93.18) | 3(3.41) | 3(3.41) | 0.95 | 0.05 | Â |
| Â | Â | AA | AG | GG | A | G | Â |
g. 61276048G > A | Non-black | 19 (87.50) | 3(12.5) | 0 | 0.93 | 0.07 | 0.19 |
| Â | Black | 80 (93.18) | 3(3.41) | 3(3.41) | 0.95 | 0.05 | Â |
| Â | Â | AA | AT | TT | A | T | Â |
g. 61,275,998 T > A | Non-black | 19(87.50) | 3(12.5) | 0 | 0.93 | 0.07 | 0.24 |
| Â | Black | 82(93.18) | 4(4.55) | 2(2.27) | 0.95 | 0.05 | Â |
| Â | Â | TT | TC | CC | T | C | Â |
g. 61275916C > T | Non-black | 19(87.50) | 3(12.5) | 0 | 0.93 | 0.07 | 0.20 |
| Â | Black | 84(95.45) | 3(3.41) | 1(1.14) | 0.97 | 0.03 | Â |
| Â | Â | AA | AG | GG | A | G | Â |
g. 61272867G > A | Non-black | 19(87.50) | 3(12.5) | 0 | 0.93 | 0.07 | 0.25 |
| Â | Black | 81(92.04) | 4(4.55) | 3(3.41) | 0.94 | 0.06 | Â |
| Â | Â | AA | AG | GG | A | G | Â |
g. 56451746G > A | Non-black | 19(87.50) | 3(12.5) | 0 | 0.93 | 0.07 | 0.20 |
| Â | Black | 84(95.45) | 3(3.41) | 1(1.14) | 0.97 | 0.03 | Â |