Target bacterial species |  | Primer sequence (5` → 3`) | Reference | Efficiencya, % |
---|---|---|---|---|
Anaerovibrio lipolytica | F:b R:c | GAAATGGATTCTAGTGGCAAACG ACATCGGTCATGCGACCAA | [13] | 96.06 |
Butyrivibrio proteoclasticus | F: R: | GGGCTTGCTTTGGAAACTGTT CCCACCGATGTTCCTCCTAA | [13] | 100.00 |
Eubacterium ruminantium | F: R: | CTCCCGAGACTGAGGAAGCTTG GTCCATCTCACACCACCGGA | [53] | 106.08 |
Fibrobacter succinogenes | F: R: | GCGGGTAGCAAACAGGATTAGA CCCCCGGACACCCAGTAT | [53] | 100.67 |
Megaspheara elsdenii | F: R: | AGATGGGGACAACAGCTGGA CGAAAGCTCCGAAGAGCCT | [53] | 101.35 |
Prevotella bryantii | F: R: | AGCGCAGGCCGTTTGG GCTTCCTGTGCACTCAAGTCTGAC | [53] | 105.03 |
Selenomonas ruminantium | F: R: | CAATAAGCATTCCGCCTGGG TTCACTCAATGTCAAGCCCTGG | [53] | 97.91 |
Succinimonas amylolytica | F: R: | CGTTGGGCGGTCATTTGAAAC CCTGAGCGTCAGTTACTATCCAGA | [54] | 96.80 |
Streptococcus bovis | F: R: | TTCCTAGAGATAGGAAGTTTCTTCGG ATGATGGCAACTAACAATAGGGGT | [53] | 103.89 |
Succinivibrio dextrinosolvens | F: R: | TAGGAGCTTGTGCGATAGTATGG CTCACTATGTCAAGGTCAGGTAAGG | [54] | 96.80 |
Eubacterial primer 1 | F: R: | GGATTAGATACCCTGGTAGT CACGACACGAGCTGACG | [27] | 95.26 |
Eubacterial primer 2 | F: R: | GTGSTGCAYGGYTGTCGTCA ACGTCRTCCMCACCTTCCTC | [26] | 95.30 |
Eubacterial primer 3 | F: | CCTACGGGAGGCAGCAG | [29] | 99.30 |
 | R: | ATTACCGCGGCTGCTGG |  |  |