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Table 1 Amplification and sequencing primers for the 16S rRNA and gyrB genes

From: Isolation of bacteria from fermented food and grass carp intestine and their efficiencies in improving nutrient value of soybean meal in solid state fermentation

Gene

Primer

Primer sequence (5′→3′)

16S rRNA

BSF8/20 (Forward)

AGAGTTTGATCCTGGCTCAG

 

BSR534/18 (Reverse)

ATTACCGCGGCTGCTGGC

gyrB

UP-1 (Forward)

GAAGTCATCATGACCGTTCTGCA(TC)GC(TCAG)GG(TCAG)GG(TCAG)AA(AG)TT(TC)GAGAAGTCATCATGACCGTTCTGCAYGCNGGNGGNAARTTYGA

 

UP-2r (Reverse)

AGCAGGGTACGGATGTGCGAGCC(AG)TC(TCAG)AC(AG)TC(TCAG)GC(AG)TC(TCAG)GTCATAGCAGGGTACGGATGTGCGAGCCRTCNACRTCNGCRTCNGTCAT

 

UP1S (Forward)

GAAGTCATCATGACCGTTCTGCA

 

UP2SR (Reverse)

AGCAGGGTACGGATGTGCGAGCC