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Table 3 The sequence of 16S rRNA quantitative real-time PCR primers used to quantify intestinal bacteria

From: Effects of Lactobacillus acidophilus on the growth performance and intestinal health of broilers challenged with Clostridium perfringens

Target

Primer sequence (5′→3′)b

Amplicon size, bp

Reference

C. perfringens

F: AAAGATGGCATCATCATTCAAC

R: TACCGTCATTATCTTCCCCAAA

279

[40]

Escherichia subgroupa

F: GTTAATACCTTTGCTCATTGA

R: ACCAGGGTATCTAATCCTGT

340

[41]

Lactobacillus subgroup

F: AGCAGTAGGGAATCTTCCA

R: CACCGCTACACATGGAG

341

[15]

  1. aThe targeted Escherichia subgroup contained E. coli, Hafnia alvei and Shigella species
  2. bF forward, R reverse