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Table 3 List of genes enriched or not inside the new cured gene set oxyntic mucosa tested inside the Hallmark catalogue

From: The effects of starter microbiota and the early life feeding of medium chain triglycerides on the gastric transcriptome profile of 2- or 3-week-old cesarean delivered piglets

   Trial 1 (2-week-old piglets) Trial 2 (3-week-old piglets)
Gene product Gene name Rank enrichment scorea Core enrichment Rank enrichment scorea Core enrichment
Potassium voltage-gated channel, Isk-related family, member 2 KCNE2 0.729 Yes 0.330 Yes
Epidermal growth factor EGF 0.583 Yes 0.185 Yes
Anion exchanger 2 SLC4A2 0.580 Yes 0.176 Yes
Lipoprotein lipase LPL 0.578 Yes 0.321 Yes
Potassium inwardly rectifying channel, subfamily J, member 15 KCNJ15 0.576 Yes 0.406 Yes
Chloride intracellular channel 6 CLIC6 0.495 Yes 0.070 No
Solute carrier family 2 (facilitated glucose transporter), member 4 SLC2A4 0.479 Yes 0.275 Yes
ATPase, H+/K+ exchanging, β polypeptide ATP4B 0.417 Yes 0.058 No
ATPase, H+/K+ exchanging, α polypeptide ATP4A 0.371 Yes 0.013 No
Insulin-like growth factor binding protein 5 IGFBP5 0.266 Yes 0.055 No
Pheromaxein, subunit C PHEROC 0.248 Yes −0.048 No
Acquaporin 4 AQP4 0.236 Yes 0.006 No
Potassium inwardly rectifying channel, subfamily J, member 13 KCNJ13 0.167 No 0.202 Yes
Ghrelin GHRL 0.094 No −0.237 No
Trefoil factor 1 TFF1 0.093 No 0.002 No
Pepsinogen C PGC 0.075 No −0.072 No
Insulin-like growth factor 1 IGF1 0.067 No 0.401 Yes
Pepsinogen B PGB −0.023 No −0.202 No
Chitinase, acidic CHIA −0.089 No −0.121 No
  1. aReflects the relative degree to which a gene is overrepresented at the top (positive sign) or bottom (negative sign) of the ordered dataset