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Table 5 Absolute values of the estimated effects of the 2.5% most relevant SNP by RQR

From: Regularized quantile regression for SNP marker estimation of pig growth curves

Phenotype Quantile SNP marker Estimated effect (abs) P-value* Chromossome (SSC) Position, cM
  0.20 ALGA0096701 18.93 0.099 17 55.81
  0.20 ALGA0026109 15.29 0.019 4 75.57
  0.20 ALGA0024036 14.98 0.007 4 20.55
  0.20 ALGA0038840 14.50 0.041 7 15.18
  0.20 ALGA0029474 14.15 0.060 4 122.99
  0.20 ALGA0029483 14.07 0.042 4 123.28
  0.50 ALGA0047992 30.89 0.008 8 30.17
Mature 0.50 ALGA0047995 29.47 0.006 8 30.31
Weight, 0.50 ALGA0096701 21.81 0.058 17 55.81
α 1 0.50 ALGA0003761 17.22 0.098 1 50.37
  0.50 ALGA0044299 15.65 0.153 7 110.66
  0.50 ALGA0096707 15.57 0.144 17 55.84
  0.80 ALGA0007216 22.14 0.001 1 160.61
  0.80 ALGA0003761 19.86 0.018 1 50.37
  0.80 ALGA0096701 19.71 0.005 17 55.81
  0.80 ALGA0042986 15.88 0.014 7 90.01
  0.80 ALGA0029474 15.57 0.042 4 122.99
  0.80 ALGA0042863 15.57 0.009 7 86.24
  0.20 ALGA0048131 13.55 0.027 8 35.02
  0.20 ALGA0044519 13.12 0.020 7 115.23
  0.20 ALGA0096701 12.98 0.011 17 55.81
  0.20 ALGA0029483 12.50 0.029 4 123.28
  0.20 ALGA0026109 11.23 0.033 4 75.57
  0.20 ALGA0003761 10.85 0.095 1 50.37
  0.50 ALGA0026100 19.87 0.009 4 75.53
Birth 0.50 ALGA0047995 18.71 0.027 8 30.31
Weight, 0.50 ALGA0048131 18.47 0.029 8 35.02
α 2 0.50 ALGA0047992 16.36 0.062 8 30.17
  0.50 ALGA0039880 14.78 0.047 7 30.13
  0.50 ALGA0021973 14.36 0.015 4 0.28
  0.80 ALGA0048131 17.66 0.007 8 35.02
  0.80 ALGA0005071 17.64 0.002 1 80.44
  0.80 ALGA0042986 16.32 0.005 7 90.01
  0.80 ALGA0029483 15.21 0.010 4 123.28
  0.80 ALGA0003761 15.08 0.025 1 50.37
  0.80 ALGA0026769 14.49 0.073 4 90.18
  0.20 ALGA0049546 3.91 0.015 8 60.04
  0.20 ALGA0029483 3.77 0.005 4 123.28
  0.20 ALGA0096701 3.42 0.011 17 55.81
  0.20 ALGA0021973 3.31 0.014 4 0.28
  0.20 ALGA0048854 3.29 0.031 8 50.17
  0.20 ALGA0048131 3.27 0.035 8 35.02
  0.50 ALGA0048131 5.89 0.004 8 35.02
Growth 0.50 ALGA0021973 4.37 0.023 4 0.28
Rate, 0.50 ALGA0048854 4.13 0.058 8 50.17
α 3 0.50 ALGA0096701 3.66 0.075 17 55.81
  0.50 ALGA0027642 3.62 0.054 4 102.39
  0.50 ALGA0027644 3.36 0.087 4 102.41
  0.80 ALGA0003761 4.43 0.008 1 50.37
  0.80 ALGA0048131 3.74 0.018 8 35.02
  0.80 ALGA0024881 3.61 0.005 4 40.50
  0.80 ALGA0044299 3.34 0.052 7 110.66
  0.80 ALGA0026769 3.07 0.105 4 90.18
  0.80 ALGA0048133 3.01 0.034 8 35.04
  1. * P-value calculated using the bootstrap standard error