Skip to main content

Table 6 The additive and dominant effects of the SNPs on SCS and cytokines in Chinese Holstein and Sanhe cattle

From: Novel SNPs in IL-17F and IL-17A genes associated with somatic cell count in Chinese Holstein and Inner-Mongolia Sanhe cattle

SNPs   Effect SCS IL-4, IL-6, IL-17, IFN-γ, TNF-α,
Breed ng/mL pg/mL pg/mL pg/mL pg/mL
IL-17 F Holstein A 0.66 ± 0.44 −0.04 ± 0.05 −0.30 ± 5.87 −1.32 ± 0.71 0.52 ± 1.73 0.03 ± 0.05
g.24392436 C > T P value 0.14 0.43 0.96 0.06 0.76 0.56
  D −0.30 ± 0.59 0.01 ± 0.06 4.68 ± 7.69 −1.30 ± 0.92 −1.60 ± 2.26 0.03 ± 0.06
P value 0.61 0.88 0.54 0.16 0.48 0.67
Sanhe A 0.02 ± 0.35 −0.01 ± 0.03 −5.53 ± 4.31 −2.65 ± 0.98 −0.26 ± 1.47 0.05 ± 0.04
P value 0.95 0.84 0.20 <0.01 0.85 0.19
  D 0.19 ± 0.49 0.01 ± 0.04 −3.71 ± 6.02 −4.04 ± 1.31 −1.04 ± 2.06 0.03 ± 0.06
P value 0.69 0.84 0.53 <0.01 0.61 0.62
IL-17A Holstein A 0.07 ± 0.27 −0.04 ± 0.03 0.37 ± 3.81 −0.24 ± 0.46 −1.08 ± 1.12 −0.002 ± 0.03
g.24345410 A > G P value 0.78 0.20 0.92 0.59 0.34 0.96
  D 0.27 ± 0.41 0.12 ± 0.04 −5.51 ± 5.43 0.81 ± 0.66 1.23 ± 1.60 −0.02 ± 0.04
P value 0.51 <0.01 0.31 0.22 0.44 0.59
Sanhe A 0.23 ± 0.22 −0.02 ± 0.02 −5.72 ± 2.68 −1.00 ± 0.60 −0.96 ± 0.92 0.01 ± 0.025
P value 0.3 0.36 <0.05 0.10 0.3 0.79
  D −0.65 ± 0.37 0.08 ± 0.03 −1.50 ± 4.55 −0.81 ± 1.01 0.88 ± 1.57 0.01 ± 0.0412
P value 0.08 <0.01 0.74 0.42 0.57 0.31
  1. Note: A means additive effect, D means dominant effect