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Table 3 Genotype and allele frequencies and Hardy–Weinberg equilibrium test of the 2 SNPs in Chinese Holstein and Innar-Mongolia Sanhe cattle

From: Novel SNPs in IL-17F and IL-17A genes associated with somatic cell count in Chinese Holstein and Inner-Mongolia Sanhe cattle

SNP/Gene Breed Genotype frequency Allele frequency* χ 2 Test (P)
g.24392436C > T   CC CT TT C T  
IL-17 F Holstein 0.68 (n = 228) 0.27 (n = 91) 0.05 (n = 16) 0.81 0.19 3.75 (P > 0.05)
  Sanhe Cattle 0.61 (n = 76) 0.31 (n = 38) 0.07 (n = 9) 0.77 0.23 1.81 (P > 0.05)
g.24345410A > G   AA AG GG A G  
IL-17A Holstein 0.15 (n = 51) 0.44 (n = 149) 0.41 (n = 137) 0.37 0.63 0.987 (P > 0.05)
  Sanhe Cattle 0.29 (n = 36) 0.34 (n = 42) 0.36 (n = 45) 0.46 0.54 12.08 (P < 0.05)
  1. *The wild-type allele are in the left, n = number of cow. χ2 0.05(1) = 3.84