Fig. 1

Distribution of integrated haplotype score (iHS) and piHS of each SNP per chromosome. a integrated haplotype score (iHS); b transformed iHS scores in piHS = − log₁₀[1 − 2|Φ _iHS  − 0.5|] wherein Φ _iHS is the Gaussian cumulative distribution function of iHS. Markers with statistically significant piHS values (P < 0.00001) are above the dashed line. Only SNPs with MAF ≥ 0.05 were considered