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Table 1 Environmental epigenetics and epigenetic inheritance in domestic farm animals

From: Epigenetics and transgenerational inheritance in domesticated farm animals

Environmental epigenetics and domestic farm animals
Bovine Context Ref.
Mammary gland-specific hypomethylation of Hpa II sites flanking the bovine alpha S1-casein gene. Epigenetic regulation of lactation. [24]
DNA-remethylation around a STAT5-binding enhancer in the alphaS1-casein promoter is associated with abrupt shutdown of alphaS1-casein synthesis during acute mastitis. Epigenetic regulation of lactation. [25]
Transcriptome profiling of Streptococcus uberis-induced mastitis reveals fundamental differences between immune gene expression in the mammary gland and in a primary cell culture model. Epigenetic regulation of lactation. [26]
Conservation of methylation reprogramming in mammalian development: aberrant reprogramming in cloned embryos. Epigenetic changes with assisted reproductive technologies [36]
DNA methylation events associated with the suppression of milk protein gene expression during involution of the bovine mammary gland. Epigenetic regulation of lactation. [27]
Effect of maternal lactation during pregnancy Epigenetic regulation of lactation. [28]
Large offspring syndrome in cattle and sheep. Epigenetic changes with assisted reproductive technologies [33]
The production of unusually large offspring following embryo manipulation: Concepts and challenges. Epigenetic changes with assisted reproductive technologies [34]
Postnatal characteristics of calves produced by nuclear transfer cloning. Epigenetic changes with assisted reproductive technologies [35]
Epigenetic contribution to individual variation in response to lipopolysaccharide in bovine dermal fibroblasts. Epigenetic role in immunity [39]
Occurrence, absorption and metabolism of short chain fatty acids in the digestive tract of mammals. Epigenetic changes with regulation of nutrition [29]
Butyrate induces profound changes in gene expression related to multiple signal pathways in bovine kidney epithelial cells. Epigenetic changes with regulation of nutrition [30]
Transcriptome Characterization by RNA-seq Unravels the Mechanisms of Butyrate-Induced Epigenomic Regulation in Bovine Cells. Epigenetic changes with regulation of nutrition [31]
In vitro produced and cloned embryos: Effects on pregnancy, parturition and offspring. Epigenetic changes with assisted reproductive technologies [32]
Porcine   
Sulforaphane causes a major epigenetic repression of myostatin in porcine satellite cells. Histone deacetylase inhibitor affects myostatin in vitro [41]
Maternal dietary protein affects transcriptional regulation of myostatin gene distinctively at weaning and finishing stages in skeletal muscle of Meishan pigs. Maternal diet affects offspring epigenetics [43]
HOX10 mRNA expression and promoter DNA methylation in female pig offspring after in utero estradiol-17beta exposure. Maternal steroid exposure affects offspring epigenetics [48]
Investigations on transgenerational epigenetic response down the male line in F2 pigs. Paternal diet has transgenerational epigenetic effect [49]
Dietary Sulforaphane, a Histone Deacetylase Inhibitor for Cancer Prevention Epigenetic changes with regulation of nutrition [40]
Neonatal estradiol exposure alters uterine morphology and endometrial transcriptional activity in prepubertal gilts. Steroid exposure affects epigenetics [47]
Maternal dietary protein restriction and excess affects offspring gene expression and methylation of non-SMC subunits of condensin I in liver and skeletal muscle. Maternal diet affects offspring epigenetics [44]
Diet, methyl donors and DNA methylation: interactions between dietary folate, methionine and choline. Epigenetic changes with regulation of nutrition [45]
Ovine   
Periconceptional nutrition and the early programming of a life of obesity or adversity. Maternal diet affects offspring epigenetics [50]
The effect of maternal under-nutrition before muscle differentiation on the muscle fiber development of the newborn lamb. Maternal diet affects offspring epigenetics [51]
Effect of maternal dietary restriction during pregnancy on lamb carcass characteristics and muscle fiber composition. Maternal diet affects offspring epigenetics [52]
Gallus   
Comparison of the Genome-Wide DNA Methylation Profiles between Fast-Growing and Slow-Growing Broilers. Differences in epigenetics between breeds [55]
Insulin-like growth factor-1 receptor is regulated by microRNA-133 during skeletal myogenesis. Epigenetic effects during muscle development [58]
Transgenerational epigenetic effects on innate immunity in broilers: An underestimated field to be explored? Review on role of epigenetics in innate immunity [59]
DNMT gene expression and methylome in Marek's disease resistant and susceptible chickens prior to and following infection by MDV. Epigenetic role in immunity [54]
Epigenetic transgenerational inheritance study in domestic farm animals
Porcine   
Investigations on transgenerational epigenetic response down the male line in F2 pigs. Paternal diet has transgenerational epigenetic effect [49]