Prob1 | EMMIX | GOrrila |
|---|
Genes | P-value | FDR Q-value | Genes4 | Enrichment5 |
|---|
Total2 | Positive2 | Negative3 |
|---|
≥0.9 | 571 | 121 | 136 | 7.66E-13 | 8.13E-09 | 30 | 4.57 |
≥0.8 | 768 | 153 | 170 | 8.56E-12 | 9.09E-08 | 31 | 4.12 |
≥0.7 | 920 | 177 | 198 | 8.38E-10 | 2.97E-06 | 32 | 3.37 |
≥0.6 | 1109 | 210 | 237 | 1.79E-08 | 3.80E-05 | 33 | 2.93 |
≥0.5 | 1342 | 248 | 282 | 8.12E-08 | 1.08E-04 | 35 | 2.67 |
- 1Probability of genes to be located in cluster A.
- 2Genes with positive coordinates in all three datasets, see Additional file 1: Table S1 sheet “Genes with positive coordinates”.
- 3Genes with all negative coordinates in all the three datasets.
- 4Number of genes enriched in “lipid metabolic process” GO term from genes with all positive coordinates in all the three datasets.
- 5Enrichment (N, B, n, b) is defined as follows: N - is the total number of genes; B - is the total number of genes associated with a specific GO term; n - is the number of genes in the top of the user's input list or in the target set when appropriate; b - is the number of genes in the intersection; Enrichment = (b/n) / (B/N).
